Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03314 ATGATCGAGGAAGCACTAGTATGGTGTAACTGTTACAAAGTTAGTTCTCTTCCATCTCCGTCGGTCTCACTATCTCCATTTCGCTATCGCAATCATCTTCACCGTCTTCTTCGGAATGCGCCATTTTCATCTTCTGTAACTGCTCACAGAAGAAAGAGGTTTTGTGAGAAGCTTGTGTCCAACATGGCTAATTATGAAGGACAGACGGTTACTAGTGGCAGCGATGTTAGATCAGGGAGTATGATTTTTGTGCCTATTTTGGAAGATGGAGTGTTCCGGTTTGATTGTTCCGTGAATGATCGAGATGCAGCGTATCCTAGTATTTCTTTTGCGAATAGCAGGGATAGAGACATACCTATCTCGAATCAGAAGGTTCCTTTGTATATCCCTACGTTTGAGTGTCTTCTAGAGCAGCAGGTTGTCAAACTTGAGCTACCTGTAGGTTCCTCCCTTTATGGCACTGGAGAAGCTAGTGGAGATCTAGAGAGGACGGGCAAAAGAGTTTTCACATGGAACACAGATGCATGGGGTTATGGACCTGGAACTACATCCTTGTATCAATCCCATCCATGGGTGTTAGCGGTTCTTCCCAATGGTGAGGCACTTGGAATTCTTGCTGACACTACAAGGCGCTGTGAGATTGATCTGAGGAGAGAATCAACGATACAGTTTGTTGCTTCATCCTCATATCCTGTCATTACATTCGGCCCATTTTCTTCACCCACTGAAGTGTTGATATCCCTATCAAAAGCAATTGGCTATCATCAATGCCGTTGGAGTTATTTATCTGACCAGAGAGTTCTGGAGGTTGCAAAAATGTTCCGGAAAAAGTGTATACCTTGTGATGTGATATGGATGGATATTGATTACATGGATGGCTTTCGTTGTTTCACCTTTGACAAGGAGCGTTTTCGAGATCCTACATCTTTAGTGAAAGATCTCCATTATAGTGGTTTTAAAGCTATTTGGATGCTTGATCCTGGAATCAAGCATGAGGATGGTTATTTTGTATATGATAGTGGTTCTGAAAATGATGTTTGGGTCCAAAAGGCAGATGGAACTCCTTATGTTGGGGATGTGTGGCCTGGACCATGTGTCTTCCCTGACTTTACACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGATTTCATTTCCAATGGTGTTGATGGTATATGGAATGATATGAATGAACCAGCTATCTTTAAGGTTGTTACAAAAACAATGCCTGAGAGTAATGTTCATAGAGGAGATGGTGAACTGGGGGGTTGTCAGAATCATTCGTTCTATCATAATGTGTATGGTCTATTGATGGCAAGATCAACTTATGAAGGCATGAAACTAGCCAATGAAAATAAGAGGCCTTTTGTTCTTACTAGAGCTGGATTTCTTGGCAGCCAAAGATATGCTTCAACATGGACTGGAGATAATCTTTCTACCTGGGAGCATCTTCATATGAGTATCTCAATGGTACTTCAGCTGGTGAGATTCTCAGCAGCATGTCCTGATATTGGTGGATTTGCTGGAAATGCAACACCTAAGCTTTTCGGAAGGTGGATGGGTGTAGGTTCCATGTTTCCCTTTTGCCGAGGTCATTCTGAAGCTTCCACAGCTGACCATGAACCCTGGTCCTTCGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCACTGAAGAGGCGTTACCGTCTAATCCCTCTTATCTACACTCTTTTCTATTTTGCTCACACCAGGGGCACACCAGTGGCAACCCCTATTTTCTTTGCCGATCCAAAAGATCCTAGCCTGAGGAAACTTGAAAATTCGTTTTTGCTCGGTCCGGTCTTAGTGTATGCAAGCACCTTACAAAGACAGGGGTTGGATAAGATGGAGATTACTTTGCCTAAGGGAATATGGTTGAGTTTTGATTTCAATGATGGACATCCGGTAAATGATTTTCCTGCTCTTTTGGATTTGCCAGCTTTATACTTAAAAGGTGGCTCAATTATTCCTGTGGGCCTCCCTCTTCAGCATGTTGGAGAAGCTAATCCCTCAGATGACTTGACCCTTCTTGTGGCTTTAGATGAACATGTGGTTACTCTGATGGTACACAAAACTGAAGGATCATGGGAAAGACCCAAACGCCGCCTGCATATTCAGTTATTGCTGGGTGGGGGTGCAATGCTTGAAACACGGGGAAGTGATGGAGAAATTCTGCAACTAATCTTGCCTTCAGAAGAGGAGGTGTTGAAGCTAGTATCTATTAGTGAGAAGCAATACAAGGACCGTTTAGAAAATGCAACTGCAATTCCTGATGTAGAAGAGGTCTCTGGACCCAAGGGAACAGAGCTTTTAAAAACTCCCATTGAACTGAAAAATGGGGAGTGGGATCTTAAAGTTGTTCCCTGGATTGGGGGTAGAATCATCTCCATGACACACATTCCTTCAGGAACACAATGGCTCCATAGTAGGATTGAGATCAATGGATATGAGGAGTACAGTGGTACGGAGTATCGTTCTGCTGGGTGTTTGGAGGAGTATTCTGTCATTGATCGAGAACCTGGGCTGGTGGTGTTAGAGGGTGATATTGGTGGAGGATTGGTTCTTCAACGTCATATCTATGTTCCAAAGAATGTTGCCAACATCATTCAGATAGACTCTAGTATAATAGCCCGCAGTGTTGGAGCTGGTTCTGGAGGGTTCTCAAGGTTGGTTTGCTTACGAGTTCACCCGACGTTCATTCTTTTGCATCCGTCTGAATCTTTTGTTTCATTTACTTCAATGGATGGATCGGTGCATGAAGTCTTTCCTGATAGCGGGGAGCAATTCTTTGAAGGAAACCTCATTCCTAATGGTGAGTGGAAGCTCGTTGATAAATGTCTCGGCTTGGCACTGGTCAACCGATTTAGTGTAACTGAGGTATTCAAGTGTCTCGTTCACTGGGATTGTGGCACTGTCAACTTGGAGCTTTGGTCTGAGAGTAGACCTGTTTCAAAGCAATCCCCTCTTCGAATTTCACATCAATACGAGGTTCTAAGAATCCCATAA 3030 0.4347 MIEEALVWCNCYKVSSLPSPSVSLSPFRYRNHLHRLLRNAPFSSSVTAHRRKRFCEKLVSNMANYEGQTVTSGSDVRSGSMIFVPILEDGVFRFDCSVNDRDAAYPSISFANSRDRDIPISNQKVPLYIPTFECLLEQQVVKLELPVGSSLYGTGEASGDLERTGKRVFTWNTDAWGYGPGTTSLYQSHPWVLAVLPNGEALGILADTTRRCEIDLRRESTIQFVASSSYPVITFGPFSSPTEVLISLSKAIGYHQCRWSYLSDQRVLEVAKMFRKKCIPCDVIWMDIDYMDGFRCFTFDKERFRDPTSLVKDLHYSGFKAIWMLDPGIKHEDGYFVYDSGSENDVWVQKADGTPYVGDVWPGPCVFPDFTQSKVRAWWANLVKDFISNGVDGIWNDMNEPAIFKVVTKTMPESNVHRGDGELGGCQNHSFYHNVYGLLMARSTYEGMKLANENKRPFVLTRAGFLGSQRYASTWTGDNLSTWEHLHMSISMVLQLVRFSAACPDIGGFAGNATPKLFGRWMGVGSMFPFCRGHSEASTADHEPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPIFFADPKDPSLRKLENSFLLGPVLVYASTLQRQGLDKMEITLPKGIWLSFDFNDGHPVNDFPALLDLPALYLKGGSIIPVGLPLQHVGEANPSDDLTLLVALDEHVVTLMVHKTEGSWERPKRRLHIQLLLGGGAMLETRGSDGEILQLILPSEEEVLKLVSISEKQYKDRLENATAIPDVEEVSGPKGTELLKTPIELKNGEWDLKVVPWIGGRIISMTHIPSGTQWLHSRIEINGYEEYSGTEYRSAGCLEEYSVIDREPGLVVLEGDIGGGLVLQRHIYVPKNVANIIQIDSSIIARSVGAGSGGFSRLVCLRVHPTFILLHPSESFVSFTSMDGSVHEVFPDSGEQFFEGNLIPNGEWKLVDKCLGLALVNRFSVTEVFKCLVHWDCGTVNLELWSESRPVSKQSPLRISHQYEVLRIP 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03314 1009 ProSitePatterns Glycosyl hydrolases family 31 active site. 393 400 IPR030458 -
Vimu7g03314 1009 Gene3D - 583 664 IPR013780 -
Vimu7g03314 1009 CDD GH31_glucosidase_II_MalA 251 580 - -
Vimu7g03314 1009 SUPERFAMILY (Trans)glycosidases 251 580 IPR017853 -
Vimu7g03314 1009 CDD GH31_N 141 253 - -
Vimu7g03314 1009 SUPERFAMILY Glycosyl hydrolase domain 582 639 - -
Vimu7g03314 1009 SUPERFAMILY Galactose mutarotase-like 140 224 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu7g03314 1009 Pfam Glycosyl hydrolases family 31 251 664 IPR000322 GO:0004553|GO:0005975
Vimu7g03314 1009 Gene3D Glycosidases 248 582 - -
Vimu7g03314 1009 Gene3D glycosyl hydrolase (family 31) 104 236 - -
Vimu7g03314 1009 PANTHER ALPHA-GLUCOSIDASE 143 690 - -
Vimu7g03314 1009 Pfam Galactose mutarotase-like 150 215 IPR025887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03314 Vimu-Chr7 28105242 28118387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03314 75 1009 Glycoside Hydrolase AT3G23640 67.105 0.0 1390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03314 - - gmx:100809690 1777.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03314 7 28105242 28118387 Vimu7g03314 7 28105242 28118387 ECH