Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03313 ATGGCTAGATCTAAACGACGACGTTCGGGCATTGTTGCCAGCCATATCAGACCGAAAATGATTTTTCAGCCTATTCTGGAGGATGGAGTGTTTCGTTTTGATTGTTCTGTAAAGGATAGAGAAGCAGCATCTCCCAGTATTTCTTTTGTGAACGGCAAGGACAGAGACACACCTATCTCTACTGAGAAGGTTCCTCTCTATAACCCTACGTTTGAGATACGATTAGAGCAGCAGATTGTAAAACTTGAGCTGCCTGTAGGTTCCTCCCTTTATGGAACTGGAGAAGTTAGCGGACAGCTTGAGAGGACGGGCCAAAGAGTTTTCACATGGAACACTGATGCATGGGGTTATGGACCTGGAAATACATCCTTGTACCAATCACATCCGTGGGTGTTAGCTGTTCTTCCAAGTGGTGAGGGACTAGGAATCCTTGCTGACACCACAAGGCGCTGTGAGATTGATCTGAGGAAAGAATCAACAATACAGTTTGTTTCTCCATCTTCATATCCTGTCGTTACATTTGGTCCTTTTGCTTCACCCACTGAAGTGCTAAGTTCTCTATCGAAAGCAATTGGAACTGTATTTATGCCCCCGAAATGGTCTTTAGGCTATCATCAGTGCCATTCGAGTTATTTATCTGATCAGAGAGTTGTGGAGGTTGCAAAAACGTTCCAGAAGAAGTGCATACCATGTGACGTGATATGGATGGATACCGATTACATGGATGGTCTTCGTGTTTTCACATTTGACAAGGCAGACCCCATGTCATTGGTGAAAGATCTCCGAAGTAGTGGTTGTAAAGTCATTTGGATGCTTGATCCTGGAATTAAGCTGGAAGAGGGTTATTTTGCATATGACAGTGGTTCTAAATATGATGTTTGGATCCAAAATGAAGATCAAACTCCTTTCATAGGGGAGGTGTGGCCTGGGCCTTGTGTCTTCCCCGACTATACTCAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTCAAAGATTTCATTTCCAATGGTGTTGATGGTATTTGGAATGATATGAACGAACCAACTATTTTTAAGGTTGAAACAAATACAATGCCTGATAGCAATATTCATAGAGGAGATAGTGAACTTGGTGGCTGTCAGAATCATTCTTTCTATCACAATGTGTATGGTCTTCTGATGGCAAGATCGACCTATGAAGGCATGAAACTAGCTAGTGAAGAGAAACGTCCTTTTGTTCTTACAAGAGCTGGATTTATTGGCAGCCAACGGTATGCAGCAACATGGACTGGTGATAATCTTTCGACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTTAGTGGTCAGCCATTTTCAGGTGCTGATATTGGTGGATTTGCTGGAAATGCTACACCTAAACTTTTTGGAAGGTGGATGGGTGTTGGTTCCTTGTTTCCCTTTTGTCGAGGGCATTCTGAAGCTTGCACCACTGATCATGTCCCTTGGGCTTTTGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGGCGATACCGCCTAATCCCACTTATCTACACTCTTTTTTATTTTGCTCATACACGGGGCACACCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCCTAGTCTGAGGAAGCTTGAAAATTCATTTTTGCTCGGTCCAGTCTTAGTGTATGCAAGCACCATACATGCACAGGGGTTGGATAAATTGGAGATTACTTTGCCTAAGGGGATATGGTTGCGTTTTGATTTCAACGATGCACATCCGGATTTGCCAGCCTTGTACTTAAAAGGTGGCTCTATCATTCCTGTGGGTCTCTCTCTTCAGCATGTTGAAGAAGCTAACCCTTCTGATGATTTGACTCTTCTCTTGGCTTTAGACGAAAATGGAAAAGCTGAAGGTGTTCTTTTTGAGGATGATGGTGATGGATACGGTTTCACAGAAGGCAATTATTTATTAACACATTATGTGGCTAATCTTGACTCATCAGTTGTTACTGTGAGTGTACACAAAACCGAAGGATCTTGGGAAAGGCCTAAACGACGCCTGCATATTCAATTATTGCTGGGTGGGGGTGCAATGCTTGATACATGGGGAACTGATGGAGAAGTTCAGCAACTAATCTTGCCTTCTGAGGATGAGGTGTTGAAGCTAGTATCTACTAGTGAGAAGCAATACAAGGACCGCTTGGAAAGTGCAATTCCAATTCCTGATGTGGAAGAGGTTTCTGGACCCAAGAGAACAGAAAGGGCTTTCACTGAATGGAGAAGTGACATAGAAGACCATGTTAGTGGGAGGTCTAAGGAGTTTTCGAATCTGAATGATGGAGGAATTATTCAGACCAGTGATCCTAGTGACCCATTTAATACTAAGGAGGTAGTTCAATATCATGGGACTAGGTTCAATTTCAGTTTCCAAGAAATGAATGAAGAGGGGTATGAAGTATCATTTCAACCAGTACCGTTGCAGGCAATTCATATTCATTGGAGGAGGTTAAACTTCAGTTTCGAAGTAATAAACGAAGAGGGGTCTGAGGTATCATTGCAACGTGAAATTGATGCTTTGCACAAGCAATTTCAGGAACTTGATTATGCTGGAAAAGTTACCTTAAAGGCGAAATTGCGTGAACTAGCCTTGCCTGATTTAACTTTAATGTGTTCAGCTCCGGAAAAGATTAGAACAAATGATGCTCCACAGGATTTAGGATGGAAGAGAGATAAATCAGTTGAATGTGATCCTTTGTATTCGGAGCATATGGATTCACTACATTCTGCCCATGATAGCATGACTGCTCACCCTTCATCTGAGAAACCAGTCCATGACTCTAATAGCATGGAAGTTTTACCATCAATGGACCACATTCCGGTTGAAATTCATCCATTTAATGAAGGCAATGTAGATGTGAAAGCAGAAGAGAACTGTGGTTAG 2937 0.4259 MARSKRRRSGIVASHIRPKMIFQPILEDGVFRFDCSVKDREAASPSISFVNGKDRDTPISTEKVPLYNPTFEIRLEQQIVKLELPVGSSLYGTGEVSGQLERTGQRVFTWNTDAWGYGPGNTSLYQSHPWVLAVLPSGEGLGILADTTRRCEIDLRKESTIQFVSPSSYPVVTFGPFASPTEVLSSLSKAIGTVFMPPKWSLGYHQCHSSYLSDQRVVEVAKTFQKKCIPCDVIWMDTDYMDGLRVFTFDKADPMSLVKDLRSSGCKVIWMLDPGIKLEEGYFAYDSGSKYDVWIQNEDQTPFIGEVWPGPCVFPDYTQSKVRAWWANLVKDFISNGVDGIWNDMNEPTIFKVETNTMPDSNIHRGDSELGGCQNHSFYHNVYGLLMARSTYEGMKLASEEKRPFVLTRAGFIGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPFSGADIGGFAGNATPKLFGRWMGVGSLFPFCRGHSEACTTDHVPWAFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPTFFADPKDPSLRKLENSFLLGPVLVYASTIHAQGLDKLEITLPKGIWLRFDFNDAHPDLPALYLKGGSIIPVGLSLQHVEEANPSDDLTLLLALDENGKAEGVLFEDDGDGYGFTEGNYLLTHYVANLDSSVVTVSVHKTEGSWERPKRRLHIQLLLGGGAMLDTWGTDGEVQQLILPSEDEVLKLVSTSEKQYKDRLESAIPIPDVEEVSGPKRTERAFTEWRSDIEDHVSGRSKEFSNLNDGGIIQTSDPSDPFNTKEVVQYHGTRFNFSFQEMNEEGYEVSFQPVPLQAIHIHWRRLNFSFEVINEEGSEVSLQREIDALHKQFQELDYAGKVTLKAKLRELALPDLTLMCSAPEKIRTNDAPQDLGWKRDKSVECDPLYSEHMDSLHSAHDSMTAHPSSEKPVHDSNSMEVLPSMDHIPVEIHPFNEGNVDVKAEENCG 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03313 978 MobiDBLite consensus disorder prediction 930 944 - -
Vimu7g03313 978 Pfam Domain of unknown function (DUF5110) 623 691 IPR033403 -
Vimu7g03313 978 Gene3D - 602 711 IPR013780 -
Vimu7g03313 978 SUPERFAMILY Glycosyl hydrolase domain 531 589 - -
Vimu7g03313 978 CDD GH31_N 70 192 - -
Vimu7g03313 978 Gene3D - 514 597 IPR013780 -
Vimu7g03313 978 SUPERFAMILY Galactose mutarotase-like 71 160 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu7g03313 978 CDD GH31_glucosidase_II_MalA 192 529 - -
Vimu7g03313 978 SUPERFAMILY (Trans)glycosidases 182 529 IPR017853 -
Vimu7g03313 978 Gene3D glycosyl hydrolase (family 31) 39 175 - -
Vimu7g03313 978 Pfam Galactose mutarotase-like 89 154 IPR025887 -
Vimu7g03313 978 ProSitePatterns Glycosyl hydrolases family 31 active site. 340 347 IPR030458 -
Vimu7g03313 978 Pfam Glycosyl hydrolases family 31 179 605 IPR000322 GO:0004553|GO:0005975
Vimu7g03313 978 MobiDBLite consensus disorder prediction 924 946 - -
Vimu7g03313 978 PANTHER ALPHA-GLUCOSIDASE 82 664 - -
Vimu7g03313 978 Gene3D Glycosidases 195 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03313 Vimu-Chr7 28075335 28091660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03313 20 779 Glycoside Hydrolase AT3G23640 68.701 0.0 1117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03313 - - vra:106777609 1624.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03313 7 28075335 28091660 Vimu7g03313 7 28075335 28091660 ECH