Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03309 ATGCTCGAGGAACAGCCTGTTTTGTTCACGAGGAGCCCTTCCCGGAGGCGCTTGAGGCCTCGGTTTGATACTGATGATAGGGGTTGGACCTCGCTTCATGTTCTAGCCAGAAAAGGCGATCTCAAATTGGCTGAATTCCATGCCCGAATCAGCGAAGGAATCACTGTGATAAAACTACCACAATCTTCAGCATCGAATTTTGACCCCAACTACCTGTTTGACAGAAGGGTGCTTTTATTTCGAAGTTGCCAAAATTGTTTTGGAGTATATTCATATTCTACGCCATTTGGTAATTTTGAAGTAAAAGTATCCACATCGTTGGGAGCCAAGCCTTGTCCACTGTACTTGAATATTTTGCCTCGTGTAGTTGATGCTTTAAGAGTTAAATTCGTATCATACTTGTCACAAAAGGTTAAAAAACTTCTCGATGAAGGAATGAATGTCAATGTGTCTGCATGGGGCCCTAAATCGAAAGGGGTGACCCCTCTCCACCTTGCTGCGGAAGGTGGTCACATTGGAGTGATGGACGTGCTACTTGAGCATGGTGCTGACATTGATGCCAGAACCAAGGGTGCTTGTGGCTGGACACCGCTCCACATTGCAGCCAAAGAAAGGAGGAGGGATGCTGTGAAATTCTTGATAGAGAATGGAGCCTTTTTGCCACCCGATATGAATGATAGCAGATTTAACCCTCCGCTTCATTACTGCCCAGGACTAGAGTGGGCCTATGAAGAGATGAAGCGTCATCGACTGCTAGACTTATCTTCTGGAGAGACATCTTACAGCTCTGAAAGCTAA 798 0.4574 MLEEQPVLFTRSPSRRRLRPRFDTDDRGWTSLHVLARKGDLKLAEFHARISEGITVIKLPQSSASNFDPNYLFDRRVLLFRSCQNCFGVYSYSTPFGNFEVKVSTSLGAKPCPLYLNILPRVVDALRVKFVSYLSQKVKKLLDEGMNVNVSAWGPKSKGVTPLHLAAEGGHIGVMDVLLEHGADIDARTKGACGWTPLHIAAKERRRDAVKFLIENGAFLPPDMNDSRFNPPLHYCPGLEWAYEEMKRHRLLDLSSGETSYSSES 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03309 265 PANTHER ANKYRIN REPEAT-CONTAINING 25 236 - -
Vimu7g03309 265 PRINTS Ankyrin repeat signature 28 43 IPR002110 GO:0005515
Vimu7g03309 265 PRINTS Ankyrin repeat signature 174 188 IPR002110 GO:0005515
Vimu7g03309 265 ProSiteProfiles Ankyrin repeat region circular profile. 193 218 - -
Vimu7g03309 265 Gene3D - 19 250 IPR036770 -
Vimu7g03309 265 ProSiteProfiles Ankyrin repeat profile. 158 190 IPR002110 GO:0005515
Vimu7g03309 265 SMART ANK_2a 27 56 IPR002110 GO:0005515
Vimu7g03309 265 SMART ANK_2a 158 187 IPR002110 GO:0005515
Vimu7g03309 265 SMART ANK_2a 193 226 IPR002110 GO:0005515
Vimu7g03309 265 Pfam Ankyrin repeats (3 copies) 137 218 IPR002110 GO:0005515
Vimu7g03309 265 ProSiteProfiles Ankyrin repeat profile. 193 218 IPR002110 GO:0005515
Vimu7g03309 265 SUPERFAMILY Ankyrin repeat 24 235 IPR036770 -
Vimu7g03309 265 ProSiteProfiles Ankyrin repeat region circular profile. 158 190 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03309 140 248 Acyl Lipid Metabolism Gene Families AT5G53470 32.110 3.03e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03309 - - gmx:100814428 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03309 7 28034726 28036366 Vimu7g03309 7 28034726 28036366 ECH