Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03282 ATGCCAAGGTTTGGGCGTCCCAAGAATGATGGTGAGTTGAGTTCGAACCTTTACGTGGCCAATTGTGGGCCCGCAGTGGGGATTTCTGATGATGACATTGCATCTGTGTTCTGCAAATTTGGAGAGCTTAAGGGAGTTTATGCAGCAGATGAGAGTGGGACACGTGTCATTGTGGCCTATGCTGAAGAGGGCTCTGCACAAGCTGCCTTGAAGGCATTACATGGACGCCCATGTCCTGAACTTGGAGGTCGATCCATGCATATCCGTTATTCCGTGCTTCAGCCAATAATACAGGATCGAGCTAGTGACTTGGTTCCTGTATCTATCTTTGCATCAGAAGTGAGCATTCCAGGCCTTTACCTAATTCATGACTTCATTAGTGCTAAAGAAGAAGAGGAACTGCTTCAGGCTGTTGACTGCAGGCCCTGGAACAGTCTTGCAAAAAGAAGGGTTCAACACTACGGTTATGAGTTTCGTTATGATGTAAATGAGTACCCACCTGGAGTGGGTCTGTCCCCTCATATAGACACTCACTCTGCATTTGAAGATTTAATTTTCAGCCTTTCATTATCAGGGCCCTGTGTAATGGAGTTCAGACGGTATGAAAATGGAGATTGGCTTCCTAAAGTTGCCTCAAGTTCTATTGCAAAAACAGAACATACAGAAGATCAATCAAATTTTAAAAGGAGAGTTATCTATCTTCCTCCTCGGTCTTTGCTACTCTTGTCTGGAGAAGCACGTTATGCATGGCATCATTACATTCCACATCACAAGGTGTGA 780 0.4487 MPRFGRPKNDGELSSNLYVANCGPAVGISDDDIASVFCKFGELKGVYAADESGTRVIVAYAEEGSAQAALKALHGRPCPELGGRSMHIRYSVLQPIIQDRASDLVPVSIFASEVSIPGLYLIHDFISAKEEEELLQAVDCRPWNSLAKRRVQHYGYEFRYDVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCVMEFRRYENGDWLPKVASSSIAKTEHTEDQSNFKRRVIYLPPRSLLLLSGEARYAWHHYIPHHKV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03282 259 Gene3D - 161 259 IPR037151 -
Vimu7g03282 259 SMART rrm1_1 16 89 IPR000504 GO:0003723
Vimu7g03282 259 Gene3D - 5 103 IPR012677 -
Vimu7g03282 259 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 15 93 IPR000504 GO:0003723
Vimu7g03282 259 SUPERFAMILY Clavaminate synthase-like 110 257 - -
Vimu7g03282 259 Pfam 2OG-Fe(II) oxygenase superfamily 162 257 IPR027450 -
Vimu7g03282 259 PANTHER OXYGENASE-RELATED 162 259 IPR032857 GO:0070988
Vimu7g03282 259 SUPERFAMILY RNA-binding domain, RBD 9 96 IPR035979 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03282 K10770 - gmx:100777529 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03282 7 27880765 27882808 Vimu7g03282 7 27880765 27882808 ECH