Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03275 ATGCCGTCGTCCCACCGCGACCATGGCCAGGCGGCCGAGTACCAGAACCAGAACCAGCACCACCCCCACCACTACAGAAGAAAATTGGTAAACACTCATCATAGCGGCAACACACACCCTTTGATCTGGCTGGCGGCAATTCTCTGCACGATCATAGCCATAGGTGTTGTAATAGCAGGCATAGTGGTTTTCGTGGGTTACATGGTGATCCACCCGAGAATCCCTGTGATAAGCGTCACCAAGGCTCACCTTGACCTTCTAAGCAACGACTACGCGGGTCTTCTCCAAACTCAACTCACCATCATCGTGGTGGCCCAGAACGGGAACGCCAGGGCCCATGCAACCTTTTCCGACATAAACTTCAACCTCAGCTACCAGGGCCAGCCGATAGCAAGGATGGTTGCCGAAACCTTTGATGTTCCCAGGAACAGCTCCAAGACTCTGAACTACGTTGTTCGGTCTGCTTCCATCCCCTTGACACCTGACCAGATGGAGGAAGTGGATGAGTCATGGAAGCGTGACGTGATAGGGTTTGACTTGAAAGGAAGCGCGAGAACAAGGTGGAGAGTAGGAGCCTTAGGTTCGGTTAAGTTCTGGAGCAACTTGGAGTGTGAACTCAAGTTTCGCCCTTCCAATGGGAGTTACATTAAGCACTCACGCTGCACCTCTGAGTCCAAATGA 681 0.5242 MPSSHRDHGQAAEYQNQNQHHPHHYRRKLVNTHHSGNTHPLIWLAAILCTIIAIGVVIAGIVVFVGYMVIHPRIPVISVTKAHLDLLSNDYAGLLQTQLTIIVVAQNGNARAHATFSDINFNLSYQGQPIARMVAETFDVPRNSSKTLNYVVRSASIPLTPDQMEEVDESWKRDVIGFDLKGSARTRWRVGALGSVKFWSNLECELKFRPSNGSYIKHSRCTSESK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03275 226 Gene3D - 59 207 - -
Vimu7g03275 226 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 221 - -
Vimu7g03275 226 MobiDBLite consensus disorder prediction 1 23 - -
Vimu7g03275 226 Pfam Late embryogenesis abundant protein 105 204 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03275 Vimu-Chr7 27788508 27789655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03275 - - gmx:100819030 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03275 7 27788508 27789655 Vimu7g03275 7 27788508 27789655 ECH
Vimu7g03275 7 27788508 27789655 Vimu11g00985 11 10258843 10259466 PCT