Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03270 ATGGAGCAGCTGAAGACGCTGGGTAGAGAACTTGCAATGGGGTCGCACGGGCAGTCGAAGGAGTTTCTGGACCTCATCAAGTCCATCGGCGAGGCCCGATCCAAGGCCGAGGAGGACCGCATCGTCCTCCGCGAGATCGAAACCCTAAAGCGACGCATCAACGACGCAGACACGCCCAAGCGCAAGATGAAGGAGTACATCATCCGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCCTCCTTCGGCTACATTCACGCCGTCAAGATGACTCACGACGACGCCCTCCTCCTCAAGCGCACGGGATACCTCGCCGTCACCCTCTTCCTTAGTGACGATCACGACCTCATCATCCTCATCGTTAACACTATCCAGAAGGATCTCGCCTCTGATAACTACCTCGTCGTCTGCGCCGCCCTCAACGCCGTCTGCCGCCTCATCAACGAGGAGACCATTCCCGCTGTCCTCCCCCGCGTCGTCGACCTCCTTAACCACTCCAAGGACGCTGTCCGGAAGAAGGCCGTTATGGCGCTGCATCGCTTCTACCAGAAATCTCCCTCCTCCGTCTCCCATCTGTTAACCAATTTTCGAAAGCGCTTGTGCGATAACGATCCCGGAGTCATGGGCGCTTCTCTTTGCCCTCTCTTTAATCTCGTCTCGGACGATGCTAATTCTTACAAGGATCTCGTCGTTAGCTTCGTCAACATCCTTAAACAGGTTGCAGAACACCGGTTGCCCAAGACTTATGATTATCATCAAATGCCTGCACCCTTCATTCAGATTAAGATGCTGAAAATTCTGGCATTGTTGGGAAGTGGTGACAAGCAGGCTAGTGGACACATGTACACCGTGCTCGGTGATATAATTAGGAAGAGTGATTCCATGACCAACATAGGGAATGCTGTTCTCTATGAGTGTATATGCTGTGTTGCTTCTATATATCCCAATCCTAAGTTATTAGAGGCTGCAGCGGATGTGATTGCCAAATTTTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGTATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACAAATTGCAGAACAACACCAACTGGCCGTCATTGACTGCTTAGAGTCTGCAAGTGCAAACCAAATGATGATCAATGTTGCTGAATTTCTAAATGTTGCCAGGGGCAGATGCTGGCCAGGGACTGGAATAGCTAGTGGGATTGGAACCTGCTCCAATATCAACTTAAATATGAAGTTTGGAGAGGAAAACTTGAGTTTTCCACTCATCTTTAACATATATGACCCTGATGATAGTCTGAAACGAAAAACTTTTGAACTGTTATACAAAATGACCAAGTCTTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCATTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAAGTGGCACATAATTTAATGCGGTTGATTGCTGAAGGATTTGGGGAGGATGATGATGCTGCAGATAGTCAGTTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCCAAGCTTCCTTCTGTGTTTCTTCAAGTCATCTGTTGGGTTCTTGGGGAATATGGAACAGCCGATGGAAAGTATTCTGCTTCATACATCAGTGGAAAGTTATGTGACATTGCAGAGGCATATTCTAATGATGAAAATGTGAAGGCTTATGCAATTTCAGCATTGATGAAAATTTATGCGTTTGAAGTGGCAGCTAGGAGGAAAGTGGATATCCTACCTGAGTGTCAATCTTTGATTGAAGAACTATTGGCATCCCATTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAGGCCCTTATAGGTTTGGGAGCACAAGCAATTGAAACAATAATGCCAAGAGATGCAAGTTGTGAAGACATTGAGGTTGACAATAATCTTTCTTTCCTCGATGGGTATGTTCGGCAATCTCTAGAAAGGGGTGCTCAAGCCTATATTCCCGAGGATGAGCGCACTGGAATGGGGAGTATGAACAATTTCAGAAGCCAGGATCACAATGAATCTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGGCTCCAATGCAACTGAAAGCTACTCCAGCTTCATTTGCATCTTCAGCAGACATTGTTCCGGTACCTGAGGCACTTTCTACCAGGGAAACTCACCATATTTCATCAGCGGGATCAACATCAGAAGCTGGATCGACAGAGCTTAAGCTAAGACTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCTACTTATTCGTCTTCAGCTTCTTCTGCTTCTGATTCTTATTCTACATCCCAAAAGTCAACAAATGGGGCGGCACAGGTGGATGGTGCTACAGCTGTTAATTCAAAAGTACGCGATAGTTATGAATCAAGAAAGACGCAGGTTGAGATTAATCCAGAAAAGCAAAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAAACTGAGAAAAGATTATCTACAAGCCATAAGGTTCCAAAATCTAATGCTGCAGACGGAGCTCAGGGATCAAAGGCTGCTGTTGTACCCAATGAGGTAGCTGTGGAAAAAACAATTCATCAACCCCCTCCTCCTGATTTGCTTGACTTGGGTGAATCAGCTGACACTACAGCTCCTCCCTCTGTGGATCCATTCCAGCAATTAGAAGGACTTTATGACCCAAACATTAATTCTGGAATAGGTCATAATGTAGGTGCTACTACAAATGCCCCTGATATTATGGGATTGTATTCGGAGAGTACTGGCAGTGGTGGCTATTCTGTACCTGTAAGTGGGAATAATGTAAATCTTTTATCTGAATTGTCCAATCCAGCTGTAAAAGCTACTAGTGGAGAAACAATTACGACGCCTTTGCCCCAGTCTATTAAGGGTCCTAATGCTAAAGATTCGTTGGATAAGGATGCACTAGTGAGGCAGATGGGTGTGAACCCCTCAAGTCAGAATCCTAACTTGTTCAGTGACTTGCTTGGCTAA 3099 0.4521 MEQLKTLGRELAMGSHGQSKEFLDLIKSIGEARSKAEEDRIVLREIETLKRRINDADTPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALLLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVDLLNHSKDAVRKKAVMALHRFYQKSPSSVSHLLTNFRKRLCDNDPGVMGASLCPLFNLVSDDANSYKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKMLKILALLGSGDKQASGHMYTVLGDIIRKSDSMTNIGNAVLYECICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLESASANQMMINVAEFLNVARGRCWPGTGIASGIGTCSNINLNMKFGEENLSFPLIFNIYDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYISGKLCDIAEAYSNDENVKAYAISALMKIYAFEVAARRKVDILPECQSLIEELLASHSTDLQQRAYELQALIGLGAQAIETIMPRDASCEDIEVDNNLSFLDGYVRQSLERGAQAYIPEDERTGMGSMNNFRSQDHNESLQHGLRFEAYEVPKAPMQLKATPASFASSADIVPVPEALSTRETHHISSAGSTSEAGSTELKLRLDGVQKKWGRPTYSSSASSASDSYSTSQKSTNGAAQVDGATAVNSKVRDSYESRKTQVEINPEKQKLAASLFGGSTKTEKRLSTSHKVPKSNAADGAQGSKAAVVPNEVAVEKTIHQPPPPDLLDLGESADTTAPPSVDPFQQLEGLYDPNINSGIGHNVGATTNAPDIMGLYSESTGSGGYSVPVSGNNVNLLSELSNPAVKATSGETITTPLPQSIKGPNAKDSLDKDALVRQMGVNPSSQNPNLFSDLLG 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03270 1032 MobiDBLite consensus disorder prediction 893 915 - -
Vimu7g03270 1032 Gene3D - 10 661 IPR011989 -
Vimu7g03270 1032 PIRSF AP4_epsilon 752 893 IPR017109 GO:0015031|GO:0030124
Vimu7g03270 1032 PIRSF AP4_epsilon 10 384 IPR017109 GO:0015031|GO:0030124
Vimu7g03270 1032 PIRSF AP4_epsilon 423 761 IPR017109 GO:0015031|GO:0030124
Vimu7g03270 1032 PIRSF AP4_epsilon 984 1032 IPR017109 GO:0015031|GO:0030124
Vimu7g03270 1032 SUPERFAMILY ARM repeat 19 650 IPR016024 -
Vimu7g03270 1032 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 24 883 - -
Vimu7g03270 1032 Pfam Adaptin N terminal region 426 649 IPR002553 GO:0006886|GO:0016192|GO:0030117
Vimu7g03270 1032 Pfam Adaptin N terminal region 46 370 IPR002553 GO:0006886|GO:0016192|GO:0030117
Vimu7g03270 1032 MobiDBLite consensus disorder prediction 787 880 - -
Vimu7g03270 1032 MobiDBLite consensus disorder prediction 756 775 - -
Vimu7g03270 1032 MobiDBLite consensus disorder prediction 788 818 - -
Vimu7g03270 1032 MobiDBLite consensus disorder prediction 757 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03270 Vimu-Chr7 27705748 27718345 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03270 K12400 - gmx:100819573 1603.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03270 7 27705748 27718345 Vimu7g03270 7 27705748 27718345 ECH