Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03263 ATGGCGCTAACTAGGGTTTTCGGTGCGACCGCTGGCAGGGCATTCATGGCGGCGGCGGCGAAGAGTGCGGCCAAGGTAAAAGCTTCTCCATCAGGCGGAGCAGCTGCAAAACCCGCGGGGAAGAAGACAGCTACGGTTAGAACCAACACCGGCATACAGAAGGCGGTTCCGGTCTCTTCCGAGCTCGGCAACTTCGTCGGCGCTTCTGAAGTGTCGCGAACTGTTGCGGTTAAAAAAGTGTGGGAGTACATCAAGCAGCAGAATCTTCAGAATCCTTCAAATAAGAGGGAGGTCTTTTGTGATGCAAAGCTGAAGACAATTTTTGGTGAGAAGGATAAGGTTGGGTTCACAGAGATTGCTAGATTGCTGTCTAGTCATTTCGGGAAATCAGGCTGA 396 0.5202 MALTRVFGATAGRAFMAAAAKSAAKVKASPSGGAAAKPAGKKTATVRTNTGIQKAVPVSSELGNFVGASEVSRTVAVKKVWEYIKQQNLQNPSNKREVFCDAKLKTIFGEKDKVGFTEIARLLSSHFGKSG 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03263 131 ProSiteProfiles SWIB/MDM2 domain profile. 51 129 IPR003121 -
Vimu7g03263 131 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 34 127 - -
Vimu7g03263 131 CDD SWIB-MDM2_like 56 127 - -
Vimu7g03263 131 SUPERFAMILY SWIB/MDM2 domain 46 129 IPR036885 -
Vimu7g03263 131 SMART swib_2 52 131 IPR019835 -
Vimu7g03263 131 Gene3D SWIB/MDM2 domain 46 131 IPR036885 -
Vimu7g03263 131 MobiDBLite consensus disorder prediction 28 48 - -
Vimu7g03263 131 Pfam SWIB/MDM2 domain 55 127 IPR003121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03263 Vimu-Chr7 27605994 27607539 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Vimu7g03263 SWIB 4.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03263 - - gmx:100795307 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03263 7 27605994 27607539 Vimu7g03263 7 27605994 27607539 ECH