Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03260 ATGGAGGGGGAAGAAGGAGGCATAAGGCTGAGCAAGCGAATCGCGAACGGAGAAGTTGATTACAAGACCAAATCCGGCACCGCCTGGAGCCACTCCTATCTTAACCAGAAGCCATGGCATCCTCTCTCTTATCCCAACCAACGCCGCAAGTGGATTGCCGAACAAACCCACGCCAATCGCCAACGCCGCGCCGAAGAGGTTTCTCGCGAGTTCGCGCAGGAGCAGGAGTTCTTTCGCCAAACCGCTCTCATCTCCAAGAAGGAGAAGGAAAAGGTGGAGCTTATGCAAGCTGTTAGTTTCATGTACGTTCGTCCTCCAGGTTACAATGCCGAAAGCGCCAAAGCTGCGGAGATGAATGATGAGAAGAAACGAGAGGACATGGACAAGGGACCTCAGCACGATGATGGACCTTCCTCTTCAGTACCGCAGAGTACGAATTTGAATGAAGAGAAGAAAAAACCGAGGCCCAAGGATGTTTTTGGGCGGCCTCTTCCGACAGAAGAAGAATTCGAAGTTCTTAAAAATGCACCAAGACTGGAAACAGGAGTTCCTGCCAGGGTGAAACCTTTTGCAGTTGAAGTTCGTAATGTAAAATGTTTAAGATGTGGGAACTATGGTCACCAAAGTGGTGATCGTGAATGTCCCTTGAAGGATGTTATAATGCCTAATGAGGAAAGCAGATTGAAAAGAGATGATCCCTTGAATGCTATCCTTGCTCACACAGATCCTACTGAGCCCCTAAAATGGGAGCTCAAACAGAGGCCAGGAATCAGTCCTCCTCGTGGAGGTTTCAAACCAGATGATCCCAACCAGCAGATAGTTGCCGAGGACATATTTGATGAGTATGGAGGTTTTCTTGGTATGGATAATATACCTGAGTTATTAACCAACTTTTCTAAGAAACCAAAGAAGTCCAAAAGGAGTAAGCACAAAAAGCAGCAACAAATAAATTCAGATAGTGAAGCATCATCTGACGATGGAGAAAGGAGACGTAAGAAAAAAAAGGTTAAGGTAAAGAAAAAGAAGCAAGATCGTGCAAGGTCAAGTTCATCCGAAACTTCGGTCTCTGAAGAAGGCCATAGAAGGAGCAGATACAAGAGTTTGCATTCGTCTGAAGATTCTGACAGTTACAGGAATTGTCAAAGTAGGTCTAAACAAGAGCGTTCCTTTTTGTCCAAAGGTTCTGAACGTCGTAGGCATGGTAGGAGTACACATGACAGAAGAAAGCATCCTTATTCATCCGAAGATTCCGACAGTCAGACGGATGATCAAAGTAGAAAGAATGCACAAAAGCATGAGTGGAAATATACCAAAAAAAGTAAACATGACAGAAGAAAGCATACTTATTCATCAGAAGATTCTGACAATCAGAGGGATGATCAAAGTAGAAAGAATGTACCAAAGCATGAGAGGAAAGATACAAAAAAAAGACGTTCATTTTCCAATGAGGATTTTGGTCCTGCATGTGATCATGCTGATAACAAGAGCAGGGATGTGATTTCTTATTCATCTGATTCTAGTCTTCAAAGACAACCCAAGTTTAAACAGAGCAGCCATAAGCATTCCGATTCTCAAAAGCATCACAGAAATTTTGGTTTCGATCGCTACCAAGGAAATCAGAAGAGCGGAGCTGTGCGATCTTATTCACCTGAAGATTCTGATGGGGACAGAGATTATCAAAATAGAAGAATCAAACAAAGGTATACGCCCAAGTATTCTGAACATCCCGAGAATGATATGGAAAAAGAGAACAGAAAAAAATGGTATTCATCGAAGTATTCTAGTGCCGATGGATATCATAAAAGTAAAAGAGGTAGATATGAGCGTTCTTATTCATCCGATCATTCTGATCATCGTGAGAAACATCACGAGTCAAGAAGGAACTACAAGCGATGA 1896 0.4304 MEGEEGGIRLSKRIANGEVDYKTKSGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHANRQRRAEEVSREFAQEQEFFRQTALISKKEKEKVELMQAVSFMYVRPPGYNAESAKAAEMNDEKKREDMDKGPQHDDGPSSSVPQSTNLNEEKKKPRPKDVFGRPLPTEEEFEVLKNAPRLETGVPARVKPFAVEVRNVKCLRCGNYGHQSGDRECPLKDVIMPNEESRLKRDDPLNAILAHTDPTEPLKWELKQRPGISPPRGGFKPDDPNQQIVAEDIFDEYGGFLGMDNIPELLTNFSKKPKKSKRSKHKKQQQINSDSEASSDDGERRRKKKKVKVKKKKQDRARSSSSETSVSEEGHRRSRYKSLHSSEDSDSYRNCQSRSKQERSFLSKGSERRRHGRSTHDRRKHPYSSEDSDSQTDDQSRKNAQKHEWKYTKKSKHDRRKHTYSSEDSDNQRDDQSRKNVPKHERKDTKKRRSFSNEDFGPACDHADNKSRDVISYSSDSSLQRQPKFKQSSHKHSDSQKHHRNFGFDRYQGNQKSGAVRSYSPEDSDGDRDYQNRRIKQRYTPKYSEHPENDMEKENRKKWYSSKYSSADGYHKSKRGRYERSYSSDHSDHREKHHESRRNYKR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03260 631 MobiDBLite consensus disorder prediction 354 382 - -
Vimu7g03260 631 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 39 74 IPR019339 -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 476 498 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 312 331 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 499 513 - -
Vimu7g03260 631 SMART Cir_N_3 38 74 IPR019339 -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 550 590 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 408 431 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 297 631 - -
Vimu7g03260 631 PANTHER CBF1 INTERACTING COREPRESSOR CIR 7 461 IPR040014 GO:0003714
Vimu7g03260 631 MobiDBLite consensus disorder prediction 115 133 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 446 468 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 597 623 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 112 165 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 148 165 - -
Vimu7g03260 631 MobiDBLite consensus disorder prediction 251 270 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03260 - K06066 vra:106778095 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03260 7 27594595 27600272 Vimu7g03260 7 27594595 27600272 ECH