Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03251 ATGGTCCCTAAACCAGTCATAGTGACAGGACCACCACCACCACCACCAGTCTCTTCTCCGCCAAACCCTCTCCTAAAAACCGCAGTATCAACCGTTAAAACAGAAGAAAAACCCCAAACCACCACCCTTCCCCCACCGAAAACGAACCCAGTACCATCCATCAAAACGACGCCGCAGAGGAAAACGAATTCATGGGCGCCAGCGCTAATGCTGAACACGTTGGACAACATCATCAACAACTTCATTGACCCTCCGCTCAAACCCTCCTTAGACCCCAGACACGTCCTGTCCCAAAACTTCGCCCCCGTCGATGAACTCCCTCCCACGGAGTGCCAAGTCGTCCAGGGCGCCCTACCGCCATGCCTCGACGGCGCCTACATTCGAAACGGCCCAAACCCTCAGTTCCTCCCGCGTGGACCCTATCACCTCTTCGATGGCGACGGCATGTTACATGCGCTACGCATATCCCAAGGCAAACCCACTCTCTGCAGCCGCTACGTCAAAACCTACAAATACACCATGGAAAACGACGCTGGTTTTCCTCTCATCCCCAATGTCTTCTCCGGCTTCAACTCCCTCGTTGCCTCCGCGGCGCGTGGCTCTCTCTCCGCGGCGAGGATCCTCACCGGACAGTTCAATCCCTCTAATGGCTTTGGTTTGGCCAACACCAGCTTAGCCTTCTTCGGTAACCGTCTCTTCGCGCTAGGCGAATCCGATCTCCCCTACGCTGTCAATGTTACCAGTAACGGCGACGTCGAAACAATCGGCCGTTATGACTTCAACGGCAAACTTACCGTCAGCATGACGGCGCATCCGAAGATAGACCCCGACACAGGGGAATGCTTCGCCTTCCGTTACGGTCCCATTCCCCCGTTCCTAACTTACTTCCGTTTTGACCCTAACGGGAACAAATACGACGACGTGCCTATCTTCTCCATGACTTCACCTTCGTTTCTCCACGATTTCGCCATCACCAAGAACTATGCAGTCTTCTGCGACATTCAGCTCGGAATGAATCCTCTCGACATGATCGCCGGTGGCTCCCCCGTCGGCTCCGTCGCTTCCAAGGTCCCAAGGATTGGAATCCTTCCTCGTGATGCTAAGGATGAATCCAAGATGAAGTGGTTCGACGTGCCGGGTTTTAATATAATTCACGCGATAAATGCGTGGGAGGAGGACGGGGGAAGAACGGTGGTACTGTTGGCGCCAAATATTCTGTCGGTGGAGCACGCACTGGAAAGAATGGAGCTGATTCACGCGATGGTGGAGAAGGTGAAGATCGATCTGGAGACGGGGATGGTGACGCGGCAACCGGTGTCGGCGCGGAACCTTGATTTCGCGGTTGTAAACCCGGCATTCGTTGGGAAGAAGAACAGGTTCGTTTACGCGGCGGTGGGAGACCCGATGCCGAAGATCTCGGGGGTGGTGAAGCTGGACGTGTCGAAGGCGAATGAGCGGAGGGACTGTACGGTGGGATGCAGGATGTTCGGCGAGGGGTGCTACGGCGGGGAACCTTTCTTCGTGGCGAAGGAGGAAGGGGGTGAGGAGGACGATGGGTACTTGGTGACATACGTGCACGACGAGAGGAAGAGAGAGTCGACGTTCTTGGTGATGGACACGAAGTCGCCGGAGCTGGACGTGGTGGCGGAGGTGAAGCTTCCACGGCGGGTTCCTTACGGTTTTCATGGTTTGTTTGTGAAGGAAAGTGATCTTAGGAAAGTGGGGCCGTTGTGA 1734 0.5548 MVPKPVIVTGPPPPPPVSSPPNPLLKTAVSTVKTEEKPQTTTLPPPKTNPVPSIKTTPQRKTNSWAPALMLNTLDNIINNFIDPPLKPSLDPRHVLSQNFAPVDELPPTECQVVQGALPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRISQGKPTLCSRYVKTYKYTMENDAGFPLIPNVFSGFNSLVASAARGSLSAARILTGQFNPSNGFGLANTSLAFFGNRLFALGESDLPYAVNVTSNGDVETIGRYDFNGKLTVSMTAHPKIDPDTGECFAFRYGPIPPFLTYFRFDPNGNKYDDVPIFSMTSPSFLHDFAITKNYAVFCDIQLGMNPLDMIAGGSPVGSVASKVPRIGILPRDAKDESKMKWFDVPGFNIIHAINAWEEDGGRTVVLLAPNILSVEHALERMELIHAMVEKVKIDLETGMVTRQPVSARNLDFAVVNPAFVGKKNRFVYAAVGDPMPKISGVVKLDVSKANERRDCTVGCRMFGEGCYGGEPFFVAKEEGGEEDDGYLVTYVHDERKRESTFLVMDTKSPELDVVAEVKLPRRVPYGFHGLFVKESDLRKVGPL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03251 577 PANTHER BETA-CAROTENE DIOXYGENASE 103 567 IPR004294 GO:0016702
Vimu7g03251 577 Pfam Retinal pigment epithelial membrane protein 102 567 IPR004294 GO:0016702
Vimu7g03251 577 MobiDBLite consensus disorder prediction 23 42 - -
Vimu7g03251 577 MobiDBLite consensus disorder prediction 1 22 - -
Vimu7g03251 577 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03251 Vimu-Chr7 27499085 27500964 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03251 K09840 - gmx:100777875 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03251 7 27499085 27500964 Vimu7g03251 7 27499085 27500964 ECH