Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03236 ATGCAAGTTTTGTTCCTACCAATGGAGGAGAAGTTCCCAGTAGTGATTGATGTGGAGAAAATTTGTGAGGAAGAAGAGTTAAAGAAACTAAGAGAAGCATGTGAAAGATGGGGTTCTTTCAGGATCATCAACCACTCTATTCCTCCAGCCCTAGTGGCAGACATGGAGAAGGTGGTTGAAGCTCTGCATGATCTTCCTTTGGAGGCCAAGAAACGCAACACAGAAGCCATTGCTGGTGGTGGTTACGTCGGACCAACTCCACTTAGCCCCTTATACGAGGCTATAGGAATCTATGACATTTCTTCATCACAATCTATGCACAATTTCTGTTCTCAGCTTCATGTCTCACCTCAACAAAGGTTTCCTTTATTTCTTAATCTCTCTCTTTCTTGGAACCTATTTCTGTTATCCTTTTCTTTTTTGGAAAGTTTCAGCACTTTCAAAGTAGAGGTTAATAATGGTTTTACATTTAAGATTTGTATTTTATGTAAATTTAGAGTCTTGTGTGAGGTGTTGTTGAAAATATCTTGCTCCTCCTAG 540 0.3963 MQVLFLPMEEKFPVVIDVEKICEEEELKKLREACERWGSFRIINHSIPPALVADMEKVVEALHDLPLEAKKRNTEAIAGGGYVGPTPLSPLYEAIGIYDISSSQSMHNFCSQLHVSPQQRFPLFLNLSLSWNLFLLSFSFLESFSTFKVEVNNGFTFKICILCKFRVLCEVLLKISCSS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03236 179 Gene3D - 6 128 IPR027443 -
Vimu7g03236 179 Pfam non-haem dioxygenase in morphine synthesis N-terminal 15 76 IPR026992 -
Vimu7g03236 179 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 114 - -
Vimu7g03236 179 SUPERFAMILY Clavaminate synthase-like 15 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03236 Vimu-Chr7 27422005 27422544 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03236 K23947 - gmx:100783059 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03236 7 27422005 27422544 Vimu7g03236 7 27422005 27422544 ECH