Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03220 ATGGGACTTGTGGAGCTTCTGTTGGTGGCATCCATGCCGGTGATCAAAATACTGCTAATCATTGCTGTTGGCTTAGTTCTTGCACTGGAAAACATAAATTTATTGGGAAAAGATGCAAGGATACAAGTGAATAATCTTGTACATTACGTGCTTTATCCTGCTCTGGTGGGTGGCAATTTGGCTGACACTATTACTTCTGAGAATGTTGTTTCACTGTGGTTCATGCCCGTCAATATCCTCATCACGTTTATAATAGGCTCAGCCTTAGGATGGATCCTTGTAAAATTAACAAGGCCTCCCAAACACTTGGAAGGACTAGTAATTGGTGTCTGTTCTGCAGGAAATTTAGGAAACTTGCCTGTAATCATTATCCCGGATATATGTAAAGACAAAGGTAGTCCTTTCGGAGACTCCAATATCTGCTATCAATATGGAATGGCTTATGCTTCACTTTCTATGGCGGTTGGAGCTGTTTACATATGGATTTATGTCTACAACATAATGAGAATTTCAGCAAGTATAGTTCCCAAAGAAGAACATAGAACTAGCTCATTCACACAGGAGGCTTCAGGAGAGATACTAGATTTCCTCTCTGAGGAAGAAGACCCAAAAAATCCTGATAACATGGGTGATGATGATGCATACACCCTATTGCTTTCTTCAAATCAATCCGAGGAGAAAGTGAAGGTATCAATCTCAGCTAAAATCAAAGACTCATTAGGAAAGTTTTTTGGCAACTCCAATTTCAAAGCCGTATTTTCACCAACAACTCTTGGATCGATTGTTGGGTTTATTGTTGGGGTGGTTCCCCTGATACGTAAACTCATGATTGGCAGCGACGCGCCACTTCATGTGATTGAAGACTCTGTTACCATGTTGGGGTATGTCTGCAACCCAAAACTTCCATACCGTTTTGTTTCTACTCCTCTTTGGCAATGGCAGATTTTGAATAATTTCTTAATTTCTTGGATGAATATTGAAACAGGCTTGAAAGGAGCAGATACTTCATTCTGTACAATCATTGGAATATTAGTAGTTCGATATATCATACTTCCAATTTTGGGTATTCTAGTTATTAAAGGAGCGACTCAATTGGGTTTGGTGCAACCGGATCCCTTGTATCAGTTTGTTCTTCTCCTTGAATATGCACTTCCTCCAGCAATGGCTATAGGTGTTCCTCCCACTGGAAGCCTGTCAGAAACCGCTCTTTGTTTGTACCTCTTTCATTTTGTTCCTCTTGCACCGACGATTACTCCTGGTCCTCGTGAGTGTTCGGGTGTCATATAG 1287 0.4079 MGLVELLLVASMPVIKILLIIAVGLVLALENINLLGKDARIQVNNLVHYVLYPALVGGNLADTITSENVVSLWFMPVNILITFIIGSALGWILVKLTRPPKHLEGLVIGVCSAGNLGNLPVIIIPDICKDKGSPFGDSNICYQYGMAYASLSMAVGAVYIWIYVYNIMRISASIVPKEEHRTSSFTQEASGEILDFLSEEEDPKNPDNMGDDDAYTLLLSSNQSEEKVKVSISAKIKDSLGKFFGNSNFKAVFSPTTLGSIVGFIVGVVPLIRKLMIGSDAPLHVIEDSVTMLGYVCNPKLPYRFVSTPLWQWQILNNFLISWMNIETGLKGADTSFCTIIGILVVRYIILPILGILVIKGATQLGLVQPDPLYQFVLLLEYALPPAMAIGVPPTGSLSETALCLYLFHFVPLAPTITPGPRECSGVI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03220 428 Pfam Membrane transport protein 10 392 IPR004776 GO:0016020|GO:0055085
Vimu7g03220 428 PANTHER - 1 392 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03220 Vimu-Chr7 27298594 27302704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03220 K24139 - gmx:100785182 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03220 7 27298594 27302704 Vimu7g03220 7 27298594 27302704 ECH
Vimu7g03220 7 27298594 27302704 Vimu7g03220 7 27298594 27302704 PCT