Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03174 ATGGCATTTGCTTTCCATAACTACGCTGTTCCAGTTTTTCTTTCACTTTTGGCCGTAATCCCATTTGAGGGCACCGGTGGCTCCCATCTCAGCCACAACAACCGCCGTGAGCGTGACAACCCTACTCCAAAATCCCTTCACTTCACTTTGTTCCAACACGAAAGCAGAAACAAAACAGGTTTTGTGATAGTGAATGGCGTGGAAGGAAGTGAAGGAAAGGGTGAGAGCTCAATCCCTTTTGGCACTCTTTTCGTCTTTCAGGACCCTTTGACTGCAAAACCAAACAGATCCTCCAAACAACTGGGAACTGCAGAAGGAACTTCCATAACCTCTGGTCTTGATGGACTCAGCAGCATTTCTGTTGCAAAGTTAACTCTTCGGGTGAAGAATCACAAGGGCTCCATTTCCATTGTTGGAGGCACTAATACCTTAGAGCGTTCGGATTATCCAGTTGTAGGAGGCACACAAGATTTCTTGTTTGTGCATGGCTATCTTACCTCTTCTCCACTTCATGCAAAGTCTTCAACACTTGTCTACAAGATTGGTTTTCATCTTTACTGGCCTCCACCTTCTTATTAA 579 0.4508 MAFAFHNYAVPVFLSLLAVIPFEGTGGSHLSHNNRRERDNPTPKSLHFTLFQHESRNKTGFVIVNGVEGSEGKGESSIPFGTLFVFQDPLTAKPNRSSKQLGTAEGTSITSGLDGLSSISVAKLTLRVKNHKGSISIVGGTNTLERSDYPVVGGTQDFLFVHGYLTSSPLHAKSSTLVYKIGFHLYWPPPSY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03174 192 Gene3D - 27 186 IPR044859 -
Vimu7g03174 192 Pfam Dirigent-like protein 47 181 IPR004265 -
Vimu7g03174 192 PANTHER DIRIGENT PROTEIN 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03174 Vimu-Chr7 26910436 26911014 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03174 - - gmx:100306565 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03174 7 26910436 26911014 Vimu7g03174 7 26910436 26911014 ECH
Vimu7g03174 7 26910436 26911014 Vimu7g03174 7 26910436 26911014 PCT