Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03159 ATGAAAATATTACATCCTTATTCTGGATCCAAATCCTCTTCCCAAGTTTGTATTAGTCAGTGTCAGGGACATTCTGAACGGCAACGTTTTCTGCCCTCCTTCGCTTGCAGCCGGCGTGAGATCCGTTCTGCCACCGGCGATCTCACCTCCACCGGCGCTTCTCGCGTTCAAATCGATTCAGCGTCTTTTATTTGCCAAATTCTGTTTATCATTCATTCTGTAACACAGAGGTCGATTGCATCGGGTGAAGGGGATACTGGTGGAATGATGGACACTCACGCGGAAGATTCTGTTAGACCTGAGGAGCATTTTCCTGATGAGGATCATCAATACGAAGATGGAAGCAATGGAAATATTGTATTGGAAAATGGATTGTCTGATGGTAATCAAGGTCCTGCTGATGCTGACGATCAGCTTCTAGAAATGGTTATGGACCTCAGGTTTCAGAATGACTACTTAAAGTCCCAGTTTGAGGGATTGAAAATTGTAAACAGTGTACATAGTGATTCTAGTATACAGAAAGGAGTTGGTGGCTTAGAAGATGGGGATTCTGACATTGTGAAAGAACTAAAGGAAAAAATACTATTGTTGAATAAAGAATTTCTGGAAGAAAAGCAAACAAGAATTGCATCAGAGGAGGCTTTGAAGCATCTTCAAGTGGCATACTCAGAGGCAGAAGCAAAGGGCCAGGAGCTCTCTGAAAAACTTGCAGAAGCTCAAATGAAGTTGGACCAAGAAATAAAAGAGCGTGATGAGAAGTATTCTGAACTTGACTCCAAGTTTAATAGGCTTCACAAGCGAGCAAAACAGCGTATTCAAGAAATTCAAAAGGAAAAAGATGATATTGAGGCCCGTTTCTCTGAGGTGAATGAAATTGCAGAGCGAGCATCATCCCAACAGTTAGCAATGCAACAAGAATTAGAGCGTACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAAGCGTTCATTACAACCTAAAGAGAGTGCTCTTGAAGCATTGCAACAATCACTTGCAGAAAAGGAACAGATGTTGGAGGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCACTAGTTGAGCTCTCTGCTAAGCACCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCATTGTCTGACAGAAGTAAGGCAGCTGAGTCTATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACCGGCGAAGCAGCACGACTCAGAGCGGTGGTGGAAAGTGTGAAAGGGGAGCTTTCTCACCTAAAAGAGGAGCATGAAAAAGAAAGGGAAAGCTGGGAGACTGCTTCGCAAGCACTCAAAGCAAAACTCGACATTGCAGAGAGCAACTGCATACATGCAGAAGTTGAAGTAGCCAAAATAAGAAGTCAGCTAGAATCAGAGGTATCTGCCCAAACAAGGATCCTCAATATGAGAGATATGGAATTGTTGGCTGCTAAAGAAGAGATCCGCTCTCTAGAAAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCACTTCTTCAAAAGAAAGATGCTGAACTGGCGGCTGCTAAAGATTCTGAACAACTCAGAGCTCTAGAGGAAACTCTGAAAGAGGTTGAAAATGAAGTCTTATCAATAACGGAAGAAAGAGATAAAGCTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAGGAACTTGCAGAAAGAGACACAACCCTTGAAAATGTCAAGCAACAGATAAGGAGCTTGGAAATAAAGCTTGACTCAGTTAATGCTCAGCACCTAAAAGAGAAAGAGGAATGGGGGCTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAAATGTGAGGCAATTAAGGCTGAAAATGAAGCAACTGCCACAAAAGATAAGCAAAAGGAATTGGAAGAGCTCAAACAACGATTTAAAAAACTGAAGGAAGAGCACACTTCATTTCATGATCTTGCTGATAGGACAATTGAGGAGAAAGATTATGAAATATCCAGACTTTTAGATGAAAATAAAAACCTTCGCCAGTCTCTTCAATCAAGACCACTAGTCGATCAAAATGATTCTTACACAGCAGCCTCACATAAATTGGATTCAACAAATTTAAGCCCCTCTGCCGCAGAACAGCAAATTCTGCTTTTGGCTAGACAACAAGCGCAAAGAGAGGAGGAGTTAGCACAGTCACAGCGTCATATTTTAGCTCTTCAAGAAGAAATTGAAGAGCTTGAACATGAGAATCGTCTCCACAACCAACAGACTGGATTGGCTTTTGAAAGGGCATCGTACATCCTTCCTGTATTGCTGCCTATAGTTCTCTCTTCCACTGGCCATCACCAGTTCAGGTTGCTGACCACAAGATCAGAGTCACTCCTCAAACTCTGGCCAAACCCCGCTGTGTTTGCCCTAGACATGGCTTCAGCCATGTTCTCTGGTCCTAGACACTATTGCCCATCCGGTCTTCAGTCCCAAAAACCCACCTATGCTCATTGTTTTGGTGGAGCTGATATCATCCTAGAGAGCTGGTTGGAATGTTACATGACAAAGGCAGAAATTCATCACCTCATGAATCCTTACTATATCAATGTGATAGTAGAAATCATCATTAGTACAATTCCTATCGAGGCCAATATGCAGCACAACAAATTCATCGTTACTGAGCTTCGCAACATGGAAAGATCTAAGAAAAGGGAAGGTGTAGATATGACATATTTGAAGAATGTTATATTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTTCCGGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGGTAATTTTGTCATCTTCTACTTTGCATCTTAGGATAAGACTTCATGGTTACTAG 2967 0.4173 MKILHPYSGSKSSSQVCISQCQGHSERQRFLPSFACSRREIRSATGDLTSTGASRVQIDSASFICQILFIIHSVTQRSIASGEGDTGGMMDTHAEDSVRPEEHFPDEDHQYEDGSNGNIVLENGLSDGNQGPADADDQLLEMVMDLRFQNDYLKSQFEGLKIVNSVHSDSSIQKGVGGLEDGDSDIVKELKEKILLLNKEFLEEKQTRIASEEALKHLQVAYSEAEAKGQELSEKLAEAQMKLDQEIKERDEKYSELDSKFNRLHKRAKQRIQEIQKEKDDIEARFSEVNEIAERASSQQLAMQQELERTRKQANEALKAMDGDRQQLRSANNNLRDTIEDLKRSLQPKESALEALQQSLAEKEQMLEDMRGLLQAAEEKRQAALVELSAKHQKNIESLEAQLNDALSDRSKAAESISSLQVLVAEKESRIAEMEAASTGEAARLRAVVESVKGELSHLKEEHEKERESWETASQALKAKLDIAESNCIHAEVEVAKIRSQLESEVSAQTRILNMRDMELLAAKEEIRSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLRALEETLKEVENEVLSITEERDKALQDLQSAMANHEKELAERDTTLENVKQQIRSLEIKLDSVNAQHLKEKEEWGLSLQNVEETWRIKCEAIKAENEATATKDKQKELEELKQRFKKLKEEHTSFHDLADRTIEEKDYEISRLLDENKNLRQSLQSRPLVDQNDSYTAASHKLDSTNLSPSAAEQQILLLARQQAQREEELAQSQRHILALQEEIEELEHENRLHNQQTGLAFERASYILPVLLPIVLSSTGHHQFRLLTTRSESLLKLWPNPAVFALDMASAMFSGPRHYCPSGLQSQKPTYAHCFGGADIILESWLECYMTKAEIHHLMNPYYINVIVEIIISTIPIEANMQHNKFIVTELRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEVILSSSTLHLRIRLHGY 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03159 988 Coils Coil 265 437 - -
Vimu7g03159 988 Coils Coil 652 689 - -
Vimu7g03159 988 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 130 972 - -
Vimu7g03159 988 SMART 1grip 934 976 IPR000237 -
Vimu7g03159 988 Coils Coil 755 789 - -
Vimu7g03159 988 Coils Coil 187 207 - -
Vimu7g03159 988 Coils Coil 513 540 - -
Vimu7g03159 988 Coils Coil 694 714 - -
Vimu7g03159 988 Coils Coil 442 487 - -
Vimu7g03159 988 Coils Coil 547 634 - -
Vimu7g03159 988 MobiDBLite consensus disorder prediction 80 134 - -
Vimu7g03159 988 Coils Coil 215 256 - -
Vimu7g03159 988 ProSiteProfiles GRIP domain profile. 931 978 IPR000237 -
Vimu7g03159 988 MobiDBLite consensus disorder prediction 89 113 - -
Vimu7g03159 988 Pfam GRIP domain 935 971 IPR000237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03159 Vimu-Chr7 26750960 26764768 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03159 - - gmx:100795939 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03159 7 26750960 26764768 Vimu7g03159 7 26750960 26764768 ECH