Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03157 ATGGCGACGACACGATCCGCGCCACTCCTCAAACACCTCCTGGCCCGCCTGAATCCGGCCCGATCCGTCACGTACATGCCTCGGCCCGGCGACGGCACCCCGCGGGCGGTGACGCTGATCCCGGGCGACGGGATCGGTCCGCTGGTGACCGGCGCAGTGGAGCAGGTTATGGAGGCGATGCACGCGCCAGTGTACTTCGAGAAGTACGAGGTGTACGGCGACATGAAGGCGGTACCGGTGGAGGTTTTGGATTCGATTAGGAAGAATAAGGTGTGTTTAAAGGGAGGGCTGGCAACGCCTATGGGCGGCGGTGTGAACTCGCTAAACGTGCAGCTGAGGAAGGAGCTTGATCTCTACGCTTCGCTCGTTAACTGCTTCAACCTCCCTGGCCTTCCCACGCGCCACGAGAACGTTGACATCGTTGTCATCAGAGAAAACACAGAGGGCGAGTACTCCGGCCTCGAACACGAGGTTGTTCCCGGCGTCGTTGAAAGCCTCAAGAGAAGGTGGAATGAAATTGAAAGAACTGATAAAGGAGATCGCAGTTTGTTACAGATTTTTGATGCTTTGGTTGTGGTTTGTGGATGGCAGGGTACTCAATATACGCGTAGACGTGAGGAATTTATTAACTTGATCTGGGACTTGTTTTCACTTGCTGTAGACCTGGGGTTTGGAATTTTTGTAATAACGAAGTTCTGTTCAGAGCGCATTGCTAAATATGCTTTTGAGTATGCTTACCTAAATAATAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAACTTGCAGATGGTTTATTCTTGGAATCTTGTCGAGAGGTTGCCACAAGGTATCCAGGTATCAAGTATAATGAAATCATTGTAGACAACTGCTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTAACCCCCAATCTTTATGGGAATCTTGTCGCAAATACAGCGGCAGGTATTGCCGGAGGCACCGGAGTCATGCCAGGAGGTATGGTTCTTAGTTACTAG 1020 0.5078 MATTRSAPLLKHLLARLNPARSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKYEVYGDMKAVPVEVLDSIRKNKVCLKGGLATPMGGGVNSLNVQLRKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKRRWNEIERTDKGDRSLLQIFDALVVVCGWQGTQYTRRREEFINLIWDLFSLAVDLGFGIFVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATRYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGMVLSY 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03157 339 Gene3D Isopropylmalate Dehydrogenase 23 338 - -
Vimu7g03157 339 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 33 336 - -
Vimu7g03157 339 SMART Iso_dh_2 36 339 IPR024084 -
Vimu7g03157 339 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 36 334 - -
Vimu7g03157 339 Pfam Isocitrate/isopropylmalate dehydrogenase 37 335 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03157 Vimu-Chr7 26717868 26720198 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03157 K00030 - gmx:100778831 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03157 7 26717868 26720198 Vimu7g03157 7 26717868 26720198 ECH
Vimu7g03157 7 26717868 26720198 Vimu7g03157 7 26717868 26720198 PCT