Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03154 ATGAGTGAAGAAAACTTGGTTGAGTGCTCTTTGAGAAAAAGGATGCCATTGTCACCTATCACTTTCTTGGAACAAGCTTCCACTGTCTATGGAGACAACCTCTCCATCATCTTCGATCATACTGTCAGCTTTTCTTGGAGACAAACCTATCACAGATGCCTCAAACTTGCTTCTGCTTTGGTTAACTTTGGACTTTCTCACAACGATAATGTTGCAGCTTTGGCACCAAATATTCCAGCACTGTACGAGCTTCATTTTGGTGTTCCCATGGCAGGGGGTGTTCTTTCTGCACTGAATACTCAATTGGATGTGACAGTGTTGGCTCTGATATTGGAACAATTAGAGCCATGCAAAATCATGTTTGTGGACTACCAGTTAATTGATTCTGCCCTCAAGGCGTTTGAAATTCTCTCCCAGAGAAAATGCAAGCCACCCCATATTGTTCTAATGCCATGTTATGACCAAGAACCATCTTTCTCAGTTAAGGATATCCCCCCAGGTACCTTAAACTACAATGAGCTTCTTGCAACTGGACAAAATGATTTTGAGCCTTTGAAACCAAGCAATGGATGCAATCCCATATCAGTGAACTACACCTCAGGCACCACAGGGATTCTTCCAAAAGGGGTTGTTTATAGTCATAAAGGTACTTGTCTTAATTCACTTGCAGTAATTGCTCGTTTTGAGATGAAACAAATGGCAGTGTTTCTATGGACAGTTGACATGTTTCGTTGCAATGGATGGTGCTTTCCATGGGTCATGCCTCTTATTGGTGGCACAAATATTTGCCTAAGGAATGTCTCAGCAAAAGGTATATTTGATGCAATTCACCGTTACAAGGTAACTCATTTTTGTGGTGCACCTACCCTTTTGGAAATGATTGCAAATGCATCACCAACTGACCACAGGCCTCTGCCTCATAGGGTGAATGTCACAGTTGCTGGTGTGCTGCCACCTACCCATGTTCTTAACAAGGTATCACAGCTTGGATTTGATGTGAACATAGGATATGGTATGACAGAAACTTATGGTCCTTTCATTATAAGACCGTGGAACCCCACTTCAGATGATGAACATACAAAGCTGAATTATGGTATGTCAGAGGTTATGCAGAATGTTGATGTGAAGGATCCAAAGACTAATAAAAGTACTCCTCCTGATGGTAAAACCATAGGTGAAATTGTGTTCAAAGGGGAAGCTTTGATGATGGGGTACCTTAAAAATCCACAAGCAACTGAAGAGGCTATTAGGGGTGGATGGTATATGACTGGGGACCTTGGTGTTAGACAACCAAATGGTTCTATAACAATGAAGGATAGAGCAAAGGATATGATGTATTGTGAGGGAGAAGCTGTGAGCTCACTAGAGGTGGAAGCAGTGCTGTTGAATCATCCAAAGGTTTTGAAAGCTGCTGTTGTGGGGAGATGTGATGAATATTTGGTGGAATCACCATTTGCAATTGTTGAATTGAGAGAGGGATGCAGTGCCACTGTTGAAGAAATCATCAAGTTCTGTGAAGATCATTTGGCTAGTCATATGGTTCCTAGGAGTGTGGTATTTGGAGATTTACCTGTTAATTCAACTGGGAAGGTTCAGAAATTTCGCATCAGGGAGAAGATCAAAACCGAGAGTGGAGTTACTCAATGA 1647 0.4183 MSEENLVECSLRKRMPLSPITFLEQASTVYGDNLSIIFDHTVSFSWRQTYHRCLKLASALVNFGLSHNDNVAALAPNIPALYELHFGVPMAGGVLSALNTQLDVTVLALILEQLEPCKIMFVDYQLIDSALKAFEILSQRKCKPPHIVLMPCYDQEPSFSVKDIPPGTLNYNELLATGQNDFEPLKPSNGCNPISVNYTSGTTGILPKGVVYSHKGTCLNSLAVIARFEMKQMAVFLWTVDMFRCNGWCFPWVMPLIGGTNICLRNVSAKGIFDAIHRYKVTHFCGAPTLLEMIANASPTDHRPLPHRVNVTVAGVLPPTHVLNKVSQLGFDVNIGYGMTETYGPFIIRPWNPTSDDEHTKLNYGMSEVMQNVDVKDPKTNKSTPPDGKTIGEIVFKGEALMMGYLKNPQATEEAIRGGWYMTGDLGVRQPNGSITMKDRAKDMMYCEGEAVSSLEVEAVLLNHPKVLKAAVVGRCDEYLVESPFAIVELREGCSATVEEIIKFCEDHLASHMVPRSVVFGDLPVNSTGKVQKFRIREKIKTESGVTQ 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03154 548 PANTHER ACYL-ACTIVATING ENZYME 7 542 - -
Vimu7g03154 548 Gene3D - 6 441 IPR042099 -
Vimu7g03154 548 Pfam AMP-binding enzyme C-terminal domain 456 530 IPR025110 -
Vimu7g03154 548 Pfam AMP-binding enzyme 24 445 IPR000873 -
Vimu7g03154 548 SUPERFAMILY Acetyl-CoA synthetase-like 16 542 - -
Vimu7g03154 548 CDD ttLC_FACS_AEE21_like 16 538 - -
Vimu7g03154 548 Gene3D - 442 545 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03154 Vimu-Chr7 26695767 26702259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03154 81 541 Miscellaneous Gene Families AT1G20560 49.045 8.33e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03154 - - vum:124835306 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03154 7 26695767 26702259 Vimu7g03154 7 26695767 26702259 ECH
Vimu7g03154 7 26695767 26702259 Vimu7g03154 7 26695767 26702259 PCT