Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03094 ATGATGTTAGACGGAACCGAAGATGAAGAGAAGTTTCTCGCAGCCGGAATCGCCGGTCTGCAGCAGAACTCTTTCTACATGCACCGTGCATTGGATTCCAACAATCTCCGAGACGCTTTGAAGTATTCGGCTCAGATGCTCTCAGAGCTCAGGACTTCCAAGCTTTCTCCTCACAAGTACTACGAACTATGTGCGTTCTTCTCGGATCCACCGTTACCTTTTGATTTTGTTTTCAGTTGGATCCTTTACCTAACTGCTTCTGTCCTTGCGATAGCTAATCTGCATCTCTTTTTCTCTGAATTCGGTGATTTAGATATGCGCGCCTTTGATCAGTTACGGAAACTTGAGATGTTCTTCGAGGAAGAGACACGTCGCGGTTGCTCCATTATTGATCTTTATGAACTCGTCCAGCATGCCGGAAACATTTTGCCGCGATTGTATCTCCTCTGTACAGTAGGATCAGTATACATCAAGTCCAAGGAAGCTCCCGCAAAGGATGTTCTTAAGGATCTTGTGGAGATGTGTCGTGGTATTCAACACCCTGTTCGTGGACTCTTTCTAAGGAGTTACCTTTCTCAAGTTAGTAGGGATAAATTGCCAGATATTGGTTCAGAGTACGAAGGGGATGCGGATACTGTAGCGGATGCTGTAGAATTTGTACTTCAAAATTTCACTGAAATGAACAAACTTTGGGTGCGGATGCAACATCAGGGGCCTGCCCGGGAGAAGGAGAAACGAGAAAAGGAAAGGAGCGAGTTGCGTGATCTTGTTGGGAAGAATCTTCATGTTCTCAGTCAGATTGAGGGTGTTGACCTAGATATGTACAAAGATGCCGTGCTTCCCAGAGTACTGGAGCAGGTTGTTAATTGCAAAGATGAGTTGGCTCAGTTCTACTTGATGGATTGCATAATTCAAGTCTTCCCCGATGAGTATCACTTGCAAACTCTTGATGTGTTATTGGGTGCTTACCCTCAACTTCAGGCGTCAGTTGATATCAAGACAGTGCTGTCTCAGTTAATGGAGAGGCTTTCAAATTATGCAGCTTCAAGTGCAGAGGTGTTACCAGAGTTTTTGCAAGTTGAAGCATTTTCGAAATTAAGCAATGCCATTGGCAAGGTGATAATGTTTGTGAATGGGGATGGAATCAGAACATTTGTGTTTAGAGGACTAGAGATGGTGGGTCAGTCCATGTCTAGAATTGGAGATGACCCAGATCACTTTAGGACACCGATGACAATTAGGGATGACAATGTGGGCCAAACTTTGCTGACCAGGTTGGTGATAGAGGCACAACCTGACATGCCCACTGTTGGAGTTGTAACTTTGTATTCATCACTTCTCACCTTCACGCTTCATGTTCACCCTGATCGCCTTGATTATGCAGATCAAGTCTTGGGAGCATGTGTGAAAAAACTATCTGGCAAAGGGAAAATTGAGGACAACAAGGCAACTAAGCAGATTGTTGCTCTATTAAGTGCTCCACTAGAGAAATATAACGATGTTATGACTGCATTGAAGCTTTCAAATTATCCTCGTGTAATGGAATACCTTGATATTCCAACCACTAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGGAACACACATTTCTACATCAGAAAAGGTTGATGCATTGTTTGGACTGATAAAGGGGCTCATCAAGGATTCTGACGGGGTTCCTAAAGATGAGCTTGATGAAGACGATTTCAAAGAGGAGCAGAATTCTGTTGCCCGCCTGATTCAAATGCTTTATAACGAGGATCCAGAAGAAACGTTTAAGATAATTGATACTGTGAGGAAGCACATACTGACTGGAGGACCAACACGTCTGCCTTTCACTGTTCCACCTCTTGTTTTTTCTTCTTTAAAGTTGGTCAGGCAGTTGCAAGGTCAAGAAGAAAATCCTTTTGGAGATGATGCCTCAGTAACACCAAAGAAAATATTTCAGCTTTTAAATCAGACCATCGAGACCTTGTCAGGTGTCCTGGCACCAGAATTAGCACTGCAGTTGTACTTGCAATGTGCTGAGGCTGCAAATGACTGTGATTTGGAACCTGTTGCTTATGAATTTTTTACACAAGCTTATATTCTATATGAAGAAGAAATTTCTGATTCCAGAGCACAGGTCACAGCTATCCATTTAATAATAGGAACTCTTCAAAGGATGCATGTCTTTGGTGTTGAAAACAGGGATACTTTAACTCACAAGGCCACAGGGTATTCTGCAAAGCTTTTAAAGAAGCCTGATCAGTGCAGAGCTGTATATGCATGCTCCCATCTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGGGTCCTATTATGTCTCAAACGGGCTTTACGAATTGCAAATGCTGCCCAACAAATGTCAAATGCAGCTCGAGGTAACACGGGATCAGTAATGCTCTTCATCGAGATATTAAACAAGTATCTCTACTTCTTTGAGAAGGGAAACCTACAAGTCACCGTTGCTGCTATACAGGGCCTAATCGAGTTAATTATGAATGAAATGCAGAGTGATACCACGACTTCAGATCCAGCTGCCGATGCTTTCTTAGCCAGTACTATGCGATATATAGAGTTCCAGAAACAAAAAGGTGGTACCGTAGGCGAGAAGTATGAAGCTCTCAAGGTTTCACACGCTGGATGA 2670 0.4281 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELCAFFSDPPLPFDFVFSWILYLTASVLAIANLHLFFSEFGDLDMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDAVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQASVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIMFVNGDGIRTFVFRGLEMVGQSMSRIGDDPDHFRTPMTIRDDNVGQTLLTRLVIEAQPDMPTVGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKKLSGKGKIEDNKATKQIVALLSAPLEKYNDVMTALKLSNYPRVMEYLDIPTTKVMATVIIQSIMKNGTHISTSEKVDALFGLIKGLIKDSDGVPKDELDEDDFKEEQNSVARLIQMLYNEDPEETFKIIDTVRKHILTGGPTRLPFTVPPLVFSSLKLVRQLQGQEENPFGDDASVTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMSNAARGNTGSVMLFIEILNKYLYFFEKGNLQVTVAAIQGLIELIMNEMQSDTTTSDPAADAFLASTMRYIEFQKQKGGTVGEKYEALKVSHAG 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03094 889 SUPERFAMILY ARM repeat 560 844 IPR016024 -
Vimu7g03094 889 Gene3D - 561 870 IPR042491 -
Vimu7g03094 889 PIRSF Retromer_Vps35 2 888 IPR005378 GO:0015031|GO:0030906|GO:0042147
Vimu7g03094 889 PANTHER VACUOLAR SORTING PROTEIN 35 6 64 IPR005378 GO:0015031|GO:0030906|GO:0042147
Vimu7g03094 889 FunFam Vacuolar protein sorting-associated protein 35 561 870 - -
Vimu7g03094 889 Pfam Vacuolar protein sorting-associated protein 35 13 63 IPR005378 GO:0015031|GO:0030906|GO:0042147
Vimu7g03094 889 Pfam Vacuolar protein sorting-associated protein 35 104 842 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03094 K18468 - gmx:100809289 1382.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03094 7 26233981 26244470 Vimu7g03094 7 26233981 26244470 ECH