Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03092 ATGGCTTCAGCAGCCACCAATTTCTCTCTTTCTTTCCGCACCAAACAGCAAATTCCAATCTCTAAACCCTCTTTCTTCTTCTATTCCACCAGCAAGAAGAACCATTTGCGCTTCAAATCTAATAATTTTCCTTCACACTCTGTTTCCACCGCTCGCAACTCAAGGATATGCGCCACCTCGTCTCGAGTCATGGATCCCTCCGCTGCGAAATCTGAATCCACCCTTCCCACCACCGTAGAAGTTGATTTGGGTAATCGGAGCTATCCCATTTACATCGGATCCGGGTTACTAGACCAACCAGACTATCTTCAGAGGCATGTGCATGGAAAGAGGGTCCTAGTTGTAACCAACAAAACGGTTGCACCACTTTATCTAGACAAGGTTGTTGATGCTTTGACAAGGGGAAACCCAAATGTTTCTGTGGAGAGTGTAATTTTACCTGATGGTGAGCAGTACAAGGACATGGATACTCTTATGAAAGTCTTTGACAAGGCCATTGAGTCACGACTTGACCGACGGTGTACATTTGTTGCCCTTGGTGGTGGTGTTATTGGTGATATGTGTGGCTTTGCTGCCGCTGCATTCCTACGTGGTGTTAATTTTATTCAGATTCCTACCACAGTGATGGCACAGGTTGATTCTTCCGTTGGTGGCAAAACTGGGATAAATCACCGCCTTGGAAAGAATCTGATCGGTGCTTTTTACCAACCTCAGTGTGTGCTTATAGACACAGACACGTTGAATACATTACCAGATAGGGAACTGGCATCAGGGCTTGCTGAGGTCATAAAGTATGGCCTCATTAGGGATGCAGAGTTTTTTGAGTGGCAAGAGAAAAATATGCACGCATTACTGGCTAGAGATCCTAGTGCATTGGCATATGCTATAAAGCGATCGTGTGAAAACAAGGCTGAGGTTGTGTCCTTAGATGAGAAGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATGCTATAGAAAATGGGGTTGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTGCAGCCGGCACGGTAATGGCTGTTGACATGTCATATCGCCTTGGTTGGATTGATGAATCTCTTGTAAAACGAGTTGGAGACATTTTAAAACAGTCTAAGTTACCCACGTCCCCTCCTGAGATAATGACTGTGGACATGTTTAAATCTGTCATGGCGGTTGATAAGAAGGTAGCAGATGGGTTGCTCAGGCTTATTCTTCTAAAGGGTCCTCTTGGCAATTGTGTATTCACAGGGGATTATGACAGAAAGGCCCTAGATGATACGCTTCGTGCATTCTGTAAATCCTGA 1323 0.4528 MASAATNFSLSFRTKQQIPISKPSFFFYSTSKKNHLRFKSNNFPSHSVSTARNSRICATSSRVMDPSAAKSESTLPTTVEVDLGNRSYPIYIGSGLLDQPDYLQRHVHGKRVLVVTNKTVAPLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMHALLARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIENGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDESLVKRVGDILKQSKLPTSPPEIMTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLRAFCKS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03092 440 CDD DHQS 87 434 - -
Vimu7g03092 440 Pfam 3-dehydroquinate synthase 144 402 IPR030960 -
Vimu7g03092 440 PANTHER 3-DEHYDROQUINATE SYNTHASE 78 435 - -
Vimu7g03092 440 Gene3D - 250 440 - -
Vimu7g03092 440 FunFam 3-dehydroquinate synthase 76 249 - -
Vimu7g03092 440 Hamap 3-dehydroquinate synthase [aroB]. 76 438 IPR016037 GO:0003856|GO:0005737|GO:0009073
Vimu7g03092 440 Gene3D - 63 249 - -
Vimu7g03092 440 NCBIfam 3-dehydroquinate synthase 88 428 IPR016037 GO:0003856|GO:0005737|GO:0009073
Vimu7g03092 440 SUPERFAMILY Dehydroquinate synthase-like 79 433 - -
Vimu7g03092 440 FunFam 3-dehydroquinate synthase 250 439 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03092 K01735 - gmx:100806628 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03092 7 26222350 26226756 Vimu7g03092 7 26222350 26226756 ECH