Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03090 GCTCTCTGCCCAACGCCTTTGTCTGTGTGTGTGCTACTTCTCTTTCTGTCCATTGTTGCTCCTCCTTCACCCCACTATAATTCTGAAGCAAGTTCAAGTGTCCGAGAGAGGAATGCCTTTAAATGGAGGTTCTTTAGTTTTGACCCAAAAATAAAGTACCTTTGGCACTTCCCACCCAAAGCTAGAGTTGCAGGCATTAAAATAGCCAACTTTTGCAGAAGCACCACCACCACCACCCCAATTTTTTCAGCACACACAAACCAACCTTTACTCATTCCCTTCACTGAAGAGCAAAAGGAGGAGATGGGTTGCTGCCAGTCGAGGATAGAGAGGGAAGAAACGGTGTCGCGTTGCAAATCCAGGAAGCGTTACATGAAGCAGTTCGTGCAAGCCAGACATGCTTTTTCTGCGGCACATGCTATGTACATTCGTTCGCTTCGTGCCACTGGTTCAGCACTCTTTCAGTTCGCAAATGCTGAAACCACGGTTCTCCACCACCTCAACCATCACCATCACCACCTTCCGCCACGCCCTCAGCCCATTCTCCCGCCGCCGCCGCCGCGAACTCCCACCCCGATGCCGCCGCCACCTCCTCCGCCGCCGATGAGTCTGAGCTCTTACACTTGGACTTCGGACTCTAACTCCTCCCCGGCTCTTCCCCCGCCGCCTCCACCGCCTCCCCCGGTGCCTTCCTCCGCCTGGGACTTCTGGGACCCGTTTATGCCGGCTGCGCCGGCGATGGCTTCCCGGTCGGTGACGGAGGAGGAGTGGGAGGCTACAACAACCACCGGATCAGAAGTGGTAGTGATGGCGGCGGCGAGTGTGACGGCTCCGCCGTCAGTGGTGAGCGGGTTTTCCAAGGAGACACCTAGTGAGCTTGCAATGGTTGTTTCAAGGAATAGTACCAAGGATCTTGTTGAAGTTATCAAAGAGCTCGATGATTATTTTCTCAAAGCTGCTGATGCTGGTTCTCATGTTTCTTTGATCCTTGAAGTTTCAAACTCTGGATTTTCTGATAACAGTAAAGCGTGTAAAGTGCACACCTATGGGTGGAATTTGAGTCCGTCCTTGTGGACTTGGGGTTCGAGTCCGAAGCTGAATGGGTTTGGAAAACTGACTGAGGGAACTCCCGTTTCTGTTGGTACTTTTGGGGCTAATGGAGGTGGAAGTGTTGGGCACGGGTCCACTGTGGAGAGGCTATACGCATGGGAGAAGAAGTTGTATCAAGAGGTCAAGAATGCTAAGACTATAAAGATGGAGCATGAGAAGAAGCTGGCACTGCTAAGGAAGGTGGAGATGAAGAGAGCTGACTATGTGAAGGCAGAGAAGACAAAGAAAGAAGTGGAGAAGTTAGAATCGCAAATGATGGTTGCTTCTCAAGCCATTGATAGTACATCTGCTGAAATAATCAAACTGAGGGAGGTGGAGCTGTACCCTCAACTCATTGAGCTTGTCAAAGGGGAACCATTTTTGTTCTGTTGGGAGGGACCCTTTTGTGGTCTTGGCTTGCCGGTGGGAATGGGAAAAGCGAAGAGGCATGCATTAGCCGTGGGAGCACCCTTTTCCTTCAAGGGATTAAGATTAATGTGCATGTGGAGAAGCATGTACGAGTGTCATCAAGTTCAAAAGCACATAGTTCAGCAGCTAGAGTACCTCAACACCGTACCATCAAACAACCCAACTTCTGAGATTCACAGGCAATCAACTCTTCAGCTGGAGCTTGAAGTACAGCAATGGCACCAATCTTTCTGCAATCTCTTCAAGGCTCACCGCGATTACATCCAATCCCTCACAGGTTGGCTAAGGCTCACCCTTTTCCAGTTCAGCAAAAACCCTCTAAGCAGAACCCCCGAGGAGTCAAAGATATACTCCCTCTGTGAAGAATGGCACCTTGCTGTTGATCGCATCCCAGACAATGTAGCATCCGAAGGAATAAAAAGCTTGTTAACGGTTATTCATGCCATAGTAGAGCAACAGGCAGAGGAGTATAAACAAAAGAAGAAGTCAGATTGTGCGTTCAAAGAGCTTGAGAAGAAGGTGGTTCAGCTTCGGTCTTTGGAGTGCAAGTATGGTCCATACTCCATGCCAGAATCCTCTAGTTCCATGCGAAACAAGGACTCGGTGAGCGAGAAGCGTGCCAAGGTGGAAGCTTTGAAAGCAAAGGCAGAAGAAGAGAAGAACAAATACGAGAAGGCAGTGAGTGTAACTAGGGCAATGACGCTGAACAACTTGCAAATGGGTTGCCCGCATGTGTTTCAAGGGATTGTGGGGTTTTCAAGTGTGTGCATGGAGGTTTTTGAGTCTGTATACAACAAAGCCAAAGTTGCTGAACAGGAGCATGACGTGAAGAGAATATTGCCATAG 2364 0.4945 ALCPTPLSVCVLLLFLSIVAPPSPHYNSEASSSVRERNAFKWRFFSFDPKIKYLWHFPPKARVAGIKIANFCRSTTTTTPIFSAHTNQPLLIPFTEEQKEEMGCCQSRIEREETVSRCKSRKRYMKQFVQARHAFSAAHAMYIRSLRATGSALFQFANAETTVLHHLNHHHHHLPPRPQPILPPPPPRTPTPMPPPPPPPPMSLSSYTWTSDSNSSPALPPPPPPPPPVPSSAWDFWDPFMPAAPAMASRSVTEEEWEATTTTGSEVVVMAAASVTAPPSVVSGFSKETPSELAMVVSRNSTKDLVEVIKELDDYFLKAADAGSHVSLILEVSNSGFSDNSKACKVHTYGWNLSPSLWTWGSSPKLNGFGKLTEGTPVSVGTFGANGGGSVGHGSTVERLYAWEKKLYQEVKNAKTIKMEHEKKLALLRKVEMKRADYVKAEKTKKEVEKLESQMMVASQAIDSTSAEIIKLREVELYPQLIELVKGEPFLFCWEGPFCGLGLPVGMGKAKRHALAVGAPFSFKGLRLMCMWRSMYECHQVQKHIVQQLEYLNTVPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIQSLTGWLRLTLFQFSKNPLSRTPEESKIYSLCEEWHLAVDRIPDNVASEGIKSLLTVIHAIVEQQAEEYKQKKKSDCAFKELEKKVVQLRSLECKYGPYSMPESSSSMRNKDSVSEKRAKVEALKAKAEEEKNKYEKAVSVTRAMTLNNLQMGCPHVFQGIVGFSSVCMEVFESVYNKAKVAEQEHDVKRILP 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03090 787 MobiDBLite consensus disorder prediction 167 232 - -
Vimu7g03090 787 Coils Coil 705 739 - -
Vimu7g03090 787 MobiDBLite consensus disorder prediction 177 204 - -
Vimu7g03090 787 MobiDBLite consensus disorder prediction 216 232 - -
Vimu7g03090 787 Pfam Protein of unknown function (DUF630) 102 160 IPR006868 -
Vimu7g03090 787 Pfam Protein of unknown function (DUF632) 305 487 IPR006867 -
Vimu7g03090 787 Pfam Protein of unknown function (DUF632) 527 653 IPR006867 -
Vimu7g03090 787 PANTHER UNCHARACTERIZED 102 487 - -
Vimu7g03090 787 Coils Coil 441 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03090 Vimu-Chr7 26212849 26216825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03090 303 687 Acyl Lipid Metabolism Gene Families AT2G27090 27.423 6.97e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03090 - - gmx:100808077 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03090 7 26212849 26216825 Vimu7g03090 7 26212849 26216825 ECH