Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03084 ATGGCTTCTCAAAACCCTAATCAAAGAAATTCTCTCTATCCTCAGGTAATCGATTCTAACCCCGATGCTCCCTCGCCTCTCCTCAATACCAATCCCTCATCCTCTTCGCAAACTACACTTTACCCCTCCATTGACTACAACGACCTCGTTCAAAACCTCTTTTCCGAGGATGCCTCCGCTGCTGGCTCCCCCTCCGCGCCGCTTGAGGCCATCGAGGAGGTCCTCCTCCGCATCCCCGGCGCGATCCTCAATCTCGTCGATAAGGACTACAGCGTCGAGCTTGCGTGCGGTGACTTTTCCGTCATCCGCCTCCGGCAGGGAGATAACGCCGTCGCCGTGTACGCGCGTGTCGCCGAAGAGATCCAATGGCCACTGGCGAAGGATGCGACCGCCGTGAAAGTCGACGATTCGCACTACTTCTTCTCGTTCCGCGTCCCCAAGGGCTCCGATCCCGGGGAGGAGGAAGAGGATGTTCTTAGCTACGGGTTGACGATCGCGTCGAAGGGGCAGAAGGAACTTCTGAAGGAGCTTGACGCGGTTTTGGAGAGCTGCAGCTGCTTCTCCGTGCAGAGTGTTTCGGAGAATGCGAAGAAGAAAGGGGAGGCTCTGGATGGGAGCGTGGCAAAGGAAGTTTCGCCGAAAGATTTGAAGTCGGGGAAGAAGAAGGAGATGATGGAGGAGCGGTGCGCTGCGTACTGGACGACTTTAGCGCCCAATGTGGAGGATTATAGTGGAACTGCTGCGAGGATGATCGCTGCAGGATCTGGACATGTGGTTAAGGGGATCTTGTGGTGTGGGGATGTGACCATGGACAGGTTGGAATGGGGGAATAAGGTTATGAAAAAGAAGATCACTCCTGGTTCCAATGCTGAGGTTAGTCCTCAGACCTTGAAGCGGATTAAGAGGGTTAAGAGAGTTACTAAAATGACAGAAAAAGTAGCAAATGGTTTCCTCTCTGGGGTCGTGAAAGTGTCTGGATTTTTCACCGGTTCAGTGGTAAACTCAAAAGCTGGAAAGAAATTTTTCAGCTTTCTACCGGGGGAAGTTTTACTTGCATCGTTGGATGGATTCAGTAAAGTGTGTGATGCTGTTGAAGTGGCTGGAAAGAATGTTATGTCAACGTCATCGACTGTGACAACCGAGCTTGTGAATCACAGGTAA 1161 0.5211 MASQNPNQRNSLYPQVIDSNPDAPSPLLNTNPSSSSQTTLYPSIDYNDLVQNLFSEDASAAGSPSAPLEAIEEVLLRIPGAILNLVDKDYSVELACGDFSVIRLRQGDNAVAVYARVAEEIQWPLAKDATAVKVDDSHYFFSFRVPKGSDPGEEEEDVLSYGLTIASKGQKELLKELDAVLESCSCFSVQSVSENAKKKGEALDGSVAKEVSPKDLKSGKKKEMMEERCAAYWTTLAPNVEDYSGTAARMIAAGSGHVVKGILWCGDVTMDRLEWGNKVMKKKITPGSNAEVSPQTLKRIKRVKRVTKMTEKVANGFLSGVVKVSGFFTGSVVNSKAGKKFFSFLPGEVLLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVNHR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03084 386 MobiDBLite consensus disorder prediction 1 38 - -
Vimu7g03084 386 Pfam Senescence domain 250 386 IPR009686 -
Vimu7g03084 386 PANTHER SPARTIN 7 386 IPR045036 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03084 Vimu-Chr7 26173076 26177065 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03084 K19366 - gmx:100804971 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03084 7 26173076 26177065 Vimu7g03084 7 26173076 26177065 ECH
Vimu7g03084 7 26173076 26177065 Vimu7g03084 7 26173076 26177065 PCT