Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03045 ATGGATCGCCGGGGTTGGCTCTGGAAGAAAAAATCATCTGATAAAAGCATAAAGGTTGAGGATGAGAAACCTGTCTTTTCTTATGAATCTGTTGTTCCAACCTTGTCTTCTGTGGCACGTGTAGATAAGGAGGGAAAACGTTTTTACATGAAGTCACTTGCTACATTTCTCACTGGCCTTCAAGACAACAGCAAAAATAAGAACTATGTTCAGATATCCATGGAGTCGTATACTTATATGTCTGGATTGGAAGATCAAGTTGTAAACTTAGAGGATCAACTAAAAGCTTTGGAAGCAAAGCTATCTTCAGTTCATACAGAATTAAATAACAAGAATAATCTAGTTAAACAGCATGCAAAAGTTGCAGAGGAAGCGGTATCAGGTTGGGAGAAAGCTGATGCAGAAGTTGTTTCCCTAAGATGTCAACTTGAATCGGTATCTCTCTCTAAGCTTACCGTTGATGAGAAAGCAGCTCACCTAGATGACGCCCTAAAAGAGTGCATGAAGCAGATAAGAATTGTAAAGGAAGAAAGTGAGCATAAACTGCAGGAGGTGATTCTTATGAAATCTCATCAATGGGAGAAAAGCAAGTTAGAACTTGAAGCTCAAATAGACAATTTGGATGAAGGACTACGTGAGTTAGCCAGTGAAAATGCTGCCCTTCTAAGATCACTTCAAGAAAGTTCAAACAAAATAGTGAAACTAAAAGAAGAAAAGTCTGAAGCCGAGGGAGAGGTTGAGCTTCTAACGAAGAGTGTTCAGTCGAAAGAGAAAGAAATATCTTCTTTGAAGTATGAGGTGCATGTAATTTCTAAGGAGCTAGATATCCGAAACGAAGAGAAGAATATGATAATGAGGTCTGCAGAAGTGGCAAACAAGCAGCACACAGAGGATGTCAAGAACATTGCCAAGCTAGAGAATGAGTGCCAACGACTTCGTGGTCTGTTGAGAAAGAAGTTACCTGGGGCTGCTGCGTTGGCACAAATGAAGCTAGAAGTTGAGAGTTCACATCATGTCATCAGTGCATCCCATCTAAGAAAAACTACTTCAAAAAGTGATAACCTGCAAGAATCTGAGTTTCTTTCCAAAAAATTACAGGTGTTCGAAGAAGAAACAAGGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAACTGCAGGCTTCTAAAAACTTGTATGCTAAAACAGTTGGCAGGCTTAAGCACTTGGAAGCAGAGAGACATCAAGAAAGAAGCACCCAGAAAGCAATTTTGGCAAACAATTATGAAAACTCCTTTAGAAGAATTTACAGCTACTCACCGAGCATTACTTCTATCTCTGATAATGGACACGAGGATCCAGAAAGTCCTGTTGAGTCCTGTGCAACATCAATTCTTGACCATTCTGATATAAATAGAATTGGAAGTGTAGGTAAATTTGAGAATCATAGGAGTGAAACTGTCTCAGAACTGATGGATGACTTTTTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGGTGGTGTACCTCTTGGCATCATTAGTAAAACTAGAGATACAGCCGAAGATAAAAAGGAGACTAGTTGTTTATCTTCAAATCAAAATTGTTTTGACACGACGAACAAAACTGAAAGTAATAACCCCAACAAGGCAGCTGAACATGATGTGCATATGCAAGATCTCGAAGAACAAAAGCTGATGTTACAGGAAAACATGCAACTTCTAGAAGAACTGAAAGAACAATTGGCGTCGTCCCACAAATCATGTAGTTTAACTGAAATTCAGCTGAAATGTATGACTGAGTCTTACAAGTCGCTTCAAACTCGTGTAGAGGAGTTAGAAAAAGAAAATAAGAATTTAAAGGAAAAGATGGATGAGCTAAAGAATGATCTTACAGAGGAAAAACAAAGTCATCACGATGCTTTGGTGAGATACAAAGAAATTGAGGAGAAAATGCAAAGGGACACGTGCTCGGTGTGTGCATCAAATTCAACAGCAAACTCCGGGAAGGAAAAAGAGCTAGCAGCTGCAGAGAAAAGGCTGGCAGAATGCCAGGAGACTCTTTCTATACTTGGTAGACAGTTGCAAGCCATGTGCCCCCAGATAGGTGTAACCACGACCCATCATAGTAAAAGGCTTCAAGTGAATGAAAAGTTAGCCAAACCATCTTATGGCTGGTCTAATTCTTACGGATCCTGTAACTCAAATGAAATTGAGCATGCTGAGGCATGTAGCGTTGTGGCTGATGAGTTTTCATCTCATACCTCTGGTGCCACATCATGCCTCTCAGACACCGAAGGCAACTTTTGGTTAAACTCTTAA 2304 0.3993 MDRRGWLWKKKSSDKSIKVEDEKPVFSYESVVPTLSSVARVDKEGKRFYMKSLATFLTGLQDNSKNKNYVQISMESYTYMSGLEDQVVNLEDQLKALEAKLSSVHTELNNKNNLVKQHAKVAEEAVSGWEKADAEVVSLRCQLESVSLSKLTVDEKAAHLDDALKECMKQIRIVKEESEHKLQEVILMKSHQWEKSKLELEAQIDNLDEGLRELASENAALLRSLQESSNKIVKLKEEKSEAEGEVELLTKSVQSKEKEISSLKYEVHVISKELDIRNEEKNMIMRSAEVANKQHTEDVKNIAKLENECQRLRGLLRKKLPGAAALAQMKLEVESSHHVISASHLRKTTSKSDNLQESEFLSKKLQVFEEETRTLKEALASSNAELQASKNLYAKTVGRLKHLEAERHQERSTQKAILANNYENSFRRIYSYSPSITSISDNGHEDPESPVESCATSILDHSDINRIGSVGKFENHRSETVSELMDDFLEVEKMACLSDNGGVPLGIISKTRDTAEDKKETSCLSSNQNCFDTTNKTESNNPNKAAEHDVHMQDLEEQKLMLQENMQLLEELKEQLASSHKSCSLTEIQLKCMTESYKSLQTRVEELEKENKNLKEKMDELKNDLTEEKQSHHDALVRYKEIEEKMQRDTCSVCASNSTANSGKEKELAAAEKRLAECQETLSILGRQLQAMCPQIGVTTTHHSKRLQVNEKLAKPSYGWSNSYGSCNSNEIEHAEACSVVADEFSSHTSGATSCLSDTEGNFWLNS 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03045 767 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 726 - -
Vimu7g03045 767 Coils Coil 590 631 - -
Vimu7g03045 767 Coils Coil 288 308 - -
Vimu7g03045 767 Coils Coil 80 114 - -
Vimu7g03045 767 Coils Coil 365 385 - -
Vimu7g03045 767 Coils Coil 545 579 - -
Vimu7g03045 767 SUPERFAMILY Tropomyosin 536 692 - -
Vimu7g03045 767 Coils Coil 661 688 - -
Vimu7g03045 767 Coils Coil 197 259 - -
Vimu7g03045 767 Pfam Filament-like plant protein, long coiled-coil 111 534 IPR008587 -
Vimu7g03045 767 Pfam Filament-like plant protein, long coiled-coil 524 695 IPR008587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03045 Vimu-Chr7 25658220 25661392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03045 - - gmx:100809230 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03045 7 25658220 25661392 Vimu7g03045 7 25658220 25661392 ECH