Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03029 ATGCAGAGACCCCGGCGCCGTTGCGAGGGCACAGCCATGGGGGCTATCGTTCTGGATCTTCGACCCGGTCTCGGTATCGGGCCCTTCAATTTAGGGATGCCCATTTGCGAAGCATTTGCTCAGATAGAGCAGCAGCCAAATATATATGACGTGGTGCATGTGAAGTATTTTGATGAGGCTAGTATCGGTGGCATCGCCTTTGAACCGCTGAAGTTAGATATTGTGATTAGCTTTCCCGATCATGGCTTCCATCTTCGTTTCGACCCGTGGTCTCAGAGACTGCGGCTGATTGAAATATTTGACGTAAAGCGACTTCAGATGCGCTATTCTACTTCCTTGATAGGGGGGCCATCAACATTGGCTACGTTTGTTGCTGTATATGCACTGTTTGGACCAACATATCCTGGAATTTTTGACAAGGATAGAGGCATTTACACCCTATTCTATCCGGGCCTTTCTTTTGCCTTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGACGGTGGAGTGGAGTTGCCATTAGAGTTTCCTGATGGGACCACGCCTGTAACCTGCCGTGTTTCTATATATGACAGCTCCTCTGGTAAGAAGGTTGGTGTGGGGTCCTTAATGGATAAGGCTTCTGCTCCACCATTACCGGTTGGAAGCATTTATATGGAAGAGGTCCATGTAAAGCTGCGAGAAGAATTGTATTTTACAGTTGGCTCTCAACATATTCCGTTTGGTGCATCTCCTCAGGATGTTTGGACGGAGCTTGGGCGTCCTTGTGGAATTCATCAAAAGCAGGTGGATCAAATGGGTATTCATTCTGCCTCTGATATTAGACCAAGGACAACTTTATGTGGAGATTACTTTTATAATTATTTCACTCGTGGTCTGGACATCTTATTTGATGGAAAGACCCATAAAATCAAGAAGTTTGTTTTGCATTCCAACTTCCCCGGTCATGCGGATTTCAATTCTTATATTAAGTGCAACTTTGTTATCTATGGTGCAGATTCAGCTGGGGGATCTTTCGAGGAAGTAAATAATAGCAAACAAAGGGTTATTACACCTAGCACCAAATGGGAACAAGTGAAGGAAATACTTGGGGATTGTGGACGAGCTGCCATTCAAACCCAAGGCTCTGCAACTAACCCATTTGGCTCAACATTTGTTTATGGTTATCAAAATATTGCCTTTGAGGTGATGAAGAATGGTTATATTGCAACAATAACTCTCTTCCAATCATGA 1236 0.4426 MQRPRRRCEGTAMGAIVLDLRPGLGIGPFNLGMPICEAFAQIEQQPNIYDVVHVKYFDEASIGGIAFEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYSTSLIGGPSTLATFVAVYALFGPTYPGIFDKDRGIYTLFYPGLSFAFPIPSQFTDCCHDGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGSLMDKASAPPLPVGSIYMEEVHVKLREELYFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMGIHSASDIRPRTTLCGDYFYNYFTRGLDILFDGKTHKIKKFVLHSNFPGHADFNSYIKCNFVIYGADSAGGSFEEVNNSKQRVITPSTKWEQVKEILGDCGRAAIQTQGSATNPFGSTFVYGYQNIAFEVMKNGYIATITLFQS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03029 411 Pfam Phagosome assembly factor 1 26 409 IPR005373 -
Vimu7g03029 411 PANTHER UPF0183 PROTEIN 16 411 IPR039156 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03029 K27411 - gmx:100781434 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03029 7 25533815 25538401 Vimu7g03029 7 25533815 25538401 ECH