Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03026 ATGGAACTGCAGCTACAGCCAAAGGCGGTACCCGCGGTTGAGGTTCATGGTGGGGATTTGGAGAAGTCATATGTCACGGAGGTTCGCAACGTTGACATGGCTGAGGCAAACGAAGGTTGTTGCGTCACTGTTTTGAAGCGAAAGCGTGGTCGTCCGGCCAAGGGAGACCGTGTTCTCAAAACCACGGCACCGCCGACGAAGCATAGCAGGGACGAAGAGGATGTTTGCTTCATATGCTTCGATGGTGGAAGCCTCGTTCTCTGCGATCGCCGTACCTTACCTGGCATGCAAGCGGATACCTGTTGGCATATATGTAGCATTTGTGGGAAGGGGTCACATTATAAGTGCTATACTTGTACATATTCTTTGTGCAAGGGGTGTACAAAAAGGGCAGATTTTGTCTCTGTCAGAGAAAATAAAGGTTTATGTGGAATGTGCAAGAGGACTATAATACTAGTAGAGAATTGTGCTCAGGGAGATAAGGTACTGGTGTGTGAAGTGGATTTTGATGACAAGAGCAGCTGGGAGTATCTTTTCAAGGTGTATTGGACATATTTGAAGGAGAAGCTATCTTTGACCATTGATGAGATCCTTGAAGCTAAAAATCCATGTAAAGGTGTTGCGAGATTAGAAGTATCTGGTGTCGCAGCAGGTGTTTCATCATTACTACTCTCTCCAAAGATGGAGCTGCCAATTGGCAATATTGCGAATGATAAACTGTGGCATTATCAGGATCCAACCGGGAAGGTTCAAGGACCTTTCTCTTTAGTGCAGCTTTATAAGTGGAACGTGAGCGGATATTTTCCTGCAGATCTCAGAATATGGAGGATAGATGAGACACAAGATAATGCTGCGTTATTAATTCATGTGCTTAGTGGGAAGTGCTCAAAACTTGTGTCATTGACACACGACAGTCAGAAGCTGTCTTTGGAGACCAATAGTACATTGGAAAATAAAGAAAGTAGTCAGGATGGTGGTGTTGAGCACAATGTGACAACAAATGGAAATTCTGCGAACCACCAAATTGTTGACCAGTGTGGGGAGCAAAAATTGGTTGATACCTGTACACAATCCAATGGTAAAGATGAGTCTGTTAAGAGCAATGGTTGGCACTCTCAGTCTCCGGGTTGGACTATACAAGCAGATGGGAATAATAATGAGGGGCAAAGTGGAAATTCTGAAAGGAGAGAGGATTCGCCCAAATGTGAGGACGGTCCTCACTTACACCCTTCACTACCTTCAACTGCATTTTGTGAAAAACTCGTAGAGAATCCTTCTGATAAATTAGAGGAAGTTCATAAGATGGAGGTGAAGTCTGAAGATAATGGAAATTTTGACTTGAACAGAATTTTTGATGGTCAAAGTAATAGTGGACAAAATTATCAGAAGCAATCAGACAGTGAGGATAATTCTGGGCAATCTTCTGGTCAGAACTGGAGTTGCCCTAGTGTAACTAATCCAGTTTGTAACCTATCTACATGGCTTTCAATCTTTGGCGAACCAAATGATTTGGACGAGTCAGTTTCAGATCTGTTGGCTGAAGTGGAGGCAATGGAGTCACTTGGTGGTGGCCTGGAATCTCCCACTTCAATCATGAAATGTGGTGAGGAGCTGACTGACGGTTCTATAACTGATTGTCTAAGTTTTGCAGATGGGCTTAGCCCAATGCTTGATGCAGCAGGTAAAGGTGATGCACTGAGTTCCTCAGGTGATTTACACTTTCCATCTCAAACCACAACACCAGATGAACCAATTAAGCAAACCGACGTGTGCCATCAACATCAAAAGATATTTGGGGAGCATACATTGAACAGTTCAGAAGTTGAGTCTACTTTCTCTAAAATTAGCTGGAATCCACACATTCAATTTTCCTGGGATCCTCCTAACTGTAAGTTGACATTACAGATTATGTTGAAGGCCATTTTTCTTATCTTTAGGCTACACAGATCTTAG 1953 0.4327 MELQLQPKAVPAVEVHGGDLEKSYVTEVRNVDMAEANEGCCVTVLKRKRGRPAKGDRVLKTTAPPTKHSRDEEDVCFICFDGGSLVLCDRRTLPGMQADTCWHICSICGKGSHYKCYTCTYSLCKGCTKRADFVSVRENKGLCGMCKRTIILVENCAQGDKVLVCEVDFDDKSSWEYLFKVYWTYLKEKLSLTIDEILEAKNPCKGVARLEVSGVAAGVSSLLLSPKMELPIGNIANDKLWHYQDPTGKVQGPFSLVQLYKWNVSGYFPADLRIWRIDETQDNAALLIHVLSGKCSKLVSLTHDSQKLSLETNSTLENKESSQDGGVEHNVTTNGNSANHQIVDQCGEQKLVDTCTQSNGKDESVKSNGWHSQSPGWTIQADGNNNEGQSGNSERREDSPKCEDGPHLHPSLPSTAFCEKLVENPSDKLEEVHKMEVKSEDNGNFDLNRIFDGQSNSGQNYQKQSDSEDNSGQSSGQNWSCPSVTNPVCNLSTWLSIFGEPNDLDESVSDLLAEVEAMESLGGGLESPTSIMKCGEELTDGSITDCLSFADGLSPMLDAAGKGDALSSSGDLHFPSQTTTPDEPIKQTDVCHQHQKIFGEHTLNSSEVESTFSKISWNPHIQFSWDPPNCKLTLQIMLKAIFLIFRLHRS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03026 650 MobiDBLite consensus disorder prediction 391 405 - -
Vimu7g03026 650 SMART gyf_5 239 294 IPR003169 GO:0005515
Vimu7g03026 650 Gene3D - 240 296 IPR035445 -
Vimu7g03026 650 MobiDBLite consensus disorder prediction 357 413 - -
Vimu7g03026 650 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 484 622 - -
Vimu7g03026 650 Pfam GYF domain 241 281 IPR003169 GO:0005515
Vimu7g03026 650 CDD GYF 238 282 IPR003169 GO:0005515
Vimu7g03026 650 MobiDBLite consensus disorder prediction 357 390 - -
Vimu7g03026 650 MobiDBLite consensus disorder prediction 311 338 - -
Vimu7g03026 650 MobiDBLite consensus disorder prediction 448 480 - -
Vimu7g03026 650 ProSiteProfiles GYF domain profile. 238 292 IPR003169 GO:0005515
Vimu7g03026 650 SUPERFAMILY GYF domain 237 290 IPR035445 -
Vimu7g03026 650 MobiDBLite consensus disorder prediction 434 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03026 Vimu-Chr7 25504325 25507951 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03026 - - gmx:100800608 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03026 7 25504325 25507951 Vimu7g03026 7 25504325 25507951 ECH