Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03025 ATGAATGCAGGGAGGGAAGCAGACAGAAATGAGAGAAATCCTAAAGCAACCAAATCGAAGCGCGTGAGAAATAGGAAAAGTCCCTTTAGAGGATCAAAATCAGAATTTGGCGTGATTGAAACGACGACCTGGAGTGCATTTGGGAATAATGGCGACAACGTCGTATCTGACGCCGACGCAGAGGTACGCGGCGGGAGCATTGCCCATTTTCACCAGACCCACCCGTTGGGCCTATCAACCGATGACTTCCCTTCTGGCTCTGATTGTACTCCCTCCAAGCTCGAAGTTTCCGACGATCCCAACCTTTGGGTCCATGAAAATCACGCATTACTTCGCCCTGTTTTCAATGTTATTGATGAATGTGTGTTGAGTTTGAGCAGGTACCTAGATATTGATCCCGCTGCATGGTCTGGACTCGAGGAAACTGCTGTCTCTTCTTCAGTTTCACGTCACGTCGGACCCTTATTGAGACTATTATCAGAAGAATCTGGTGATGATTATTCCGAAAGGTCAGATAAAGAACTTGCTTTGTCCGGAGCTGTTGATGCCATGGTACTTAGCATGGAAAGTAATTCAGAGTCTCTCAGGTCTAGAAGGGAGAAGCTACGTGAATACGAACATCAATGTCGTGAAAAGTTTTTAACTTCTGATGTTGAACCAAATTCTGAGAAGATACATTTGCAATTAGACACCAAGGAAGAGACCGGTACTCCTTTCCATGATTGTGAAGAACCACATCAGGGATCTATTCATAGTAATATTGATGAGAGTCGAATTGAAGTGGTAATGATGCTTAGCTATCCAAGGAAAGTGGCAGTGCTTTACGAACTTCTCTGTGCTTGTCTATCAGATTTAGGTGAAAATAACAAGAAACATGGCCGCAGGAGAAAGGGCTATGATGCTCGACATCGTGTCACTCTGCGCCTGTTGGCAACTTGGCTCGATATCAAGTGGTCAAAAATGGAGGCCATTGAGACAATAGTTGCCAGTTCTGCAATGGCTTTCATTAAAGAGCAAGAGTCAAGTAAAGAAGGAACTCAATCAAAAGAAAACAAGGGGGATAAATGGAAGAAGGGTTGTATCATTGGTGCCGCTGCCCTAACTGGCGGAACTTTGATGGCTATTACTGGGGGATTAGCTGCCCCAGCTATTGCTGCTGGACTTGGGGCTTTGGCTCCAACTTTGGGTACTCTGGTCCCTGTAATTGGAGCAAGTGGATTTGCTGCAGCTGCTACTGCTGCTGGACATGTTGCTGGTTCTGTCGCTGTTGCTGCATCATTTGGAGCTGCTGGAGCAGGACTCTCTGGAACCAAAATGGCTAGGAGAGTTGGGGGTGTTGATGAGTTTGAATTCAAAGTCATTGGAGAAAATCATAACCAAGGTCTGCTTGGGGTTGAGATCATGATCTCTGGATTTGTCTTTGAGGATGAAGATTTTATAAGGCCTTGGGAGGGAATGAATGACAACTTGGAGAGGTATGCTCTACAGTGGGAGTCCAAGAATCTATATGCCCTGAGCACTGCAATTCGGGATTGGCTTACTTCAAGTAATTGGTTTGGGTTCCAGTATATGAGTAATGTGTATATGTTTGGTGCCGATATTGCCGTGCTGTGCTTTGCTTTAGGAATTGCAGCAGCACTGATGAAGCGAGGGGCAATGTTGACGGTCTTGCATAGTCTTTTAACTGCATTAGCTTGGCCGGTTACATTTCTTGCAGCAACTGAATTCATAGACAGCACATGGACAATTGCTATTGACAGATCTGATAAGGCAGGGAAGTTGCTTGCCGAAGTATTATTGGGAGGACTGCAGGGAAATAGGCCTGTTACACTTGTAGGTTACTCGCTGGGGGCAAGAGTTATTTTCAAATGTCTGGAGTGTTTGGCTGAAACAAAAAACAGTGCTGAACTGGTAGAAAGAGTTGTTCTTCTTGGAGCACCCATTGCAATCAGGGATGAAAAATGGGAAACTGTTAGAAAGATGGTAGCTGGAAGATTTATAAATGCTTACTCAAGCAATGACTGGATGCTTGGAATTGCTTTTCGTGCCAGTCTACTCTCTCAAGGATTAGCTGGAATCCAACCTGTTGACATTCCTGGGATCCAAAACGTTAATGTGACAGATCACATAGAGGGTCATTCTTCATACTTGTGGGCTACACAACCGGTCCTAGATGAACTTCAATTAGATTCGTATTATCCTGTTTTGACATAA 2214 0.4467 MNAGREADRNERNPKATKSKRVRNRKSPFRGSKSEFGVIETTTWSAFGNNGDNVVSDADAEVRGGSIAHFHQTHPLGLSTDDFPSGSDCTPSKLEVSDDPNLWVHENHALLRPVFNVIDECVLSLSRYLDIDPAAWSGLEETAVSSSVSRHVGPLLRLLSEESGDDYSERSDKELALSGAVDAMVLSMESNSESLRSRREKLREYEHQCREKFLTSDVEPNSEKIHLQLDTKEETGTPFHDCEEPHQGSIHSNIDESRIEVVMMLSYPRKVAVLYELLCACLSDLGENNKKHGRRRKGYDARHRVTLRLLATWLDIKWSKMEAIETIVASSAMAFIKEQESSKEGTQSKENKGDKWKKGCIIGAAALTGGTLMAITGGLAAPAIAAGLGALAPTLGTLVPVIGASGFAAAATAAGHVAGSVAVAASFGAAGAGLSGTKMARRVGGVDEFEFKVIGENHNQGLLGVEIMISGFVFEDEDFIRPWEGMNDNLERYALQWESKNLYALSTAIRDWLTSSNWFGFQYMSNVYMFGADIAVLCFALGIAAALMKRGAMLTVLHSLLTALAWPVTFLAATEFIDSTWTIAIDRSDKAGKLLAEVLLGGLQGNRPVTLVGYSLGARVIFKCLECLAETKNSAELVERVVLLGAPIAIRDEKWETVRKMVAGRFINAYSSNDWMLGIAFRASLLSQGLAGIQPVDIPGIQNVNVTDHIEGHSSYLWATQPVLDELQLDSYYPVLT 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03025 737 Gene3D alpha/beta hydrolase 542 728 IPR029058 -
Vimu7g03025 737 MobiDBLite consensus disorder prediction 1 17 - -
Vimu7g03025 737 Pfam Protein of unknown function (DUF726) 355 729 IPR007941 -
Vimu7g03025 737 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 71 736 IPR007941 -
Vimu7g03025 737 MobiDBLite consensus disorder prediction 1 32 - -
Vimu7g03025 737 SUPERFAMILY alpha/beta-Hydrolases 603 689 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03025 Vimu-Chr7 25490200 25496674 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03025 - - gmx:100782894 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03025 7 25490200 25496674 Vimu7g03025 7 25490200 25496674 ECH
Vimu7g03025 7 25490200 25496674 Vimu7g03025 7 25490200 25496674 PCT