Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03004 ATGGCACTTTTTAAGACACGGAAGAGATCATCATCACCATCTTACGTATCAACCCTCACAGTATTTGTGTTCATTGCACTATGTGTTTTTGGCGTCTGGATGCTATCCTCCAAGTCAGTAGTGCCACCTCAAACACAGAGCGATGAAGACATTGCAACCCGAACGTCCATTGATACCTCTACAACCAATGACGAACTCTCTGCCTCCCATGGAATGGCTGAAAAAATTCCAGAAACCAGAAAAGACACTTCATCTTCTGTCTTCGGGGACAACCCTGGACAACTTCCCGATGATGCCATCAAATCTGATGAAAAACATTCTAACATGGAGTCACAAAATCAGCACATCATGGCCAGCATGGACGCACAGCTTTCTGAGGAAAGCTCGTTAACTCAAAAGGAGCAAGCTTCCGTGATACACGAAGCTGGCGCAGATAGTGATGTGAAAATAACTGAGCCTGAGAAAGCTCAGCAAACCGTCACCACGGCTTCTAATGACATAAAAAAGGATGAAGAAATCGCCGCGGCGGCGGTGGAACATGAGGAACCAAGCATTGGAAAGCAGCAAGACGTTCAAGGTTTTGACACTAAACCGGCGGAAGAAGAAATAAACAAGGAACAATTTCTAGAGGACAAAGGCGCCGTGGAAGCAAATCCTAAACCAGACGTGTTGCAACAGGAGCCTGAGACGGCTTTAAAGGGAACAAGTTCTGAGGAGGTGTCGGAGAAGATTGAAAACCCGAAAGTAGATGAGGTTGAGGTAACACAGAAACCAAAAGCAGAGAAGAAAGGTCGTAAGTCAAAGAAGCAGTGGTCGACACAAGCTGCTCAGTCACAGAAAGAAAACAAAAGACAGCAAGTTGAATCGAACAGTGAAGAGAAACTTGAAGATCACGAATGGTACCTCTGCAATGTCACTGCCAATGAAGATTATATACCGTGTTTGGACAACGAAAAGGCAGTGAAACAGTTGCGTACCACAAGACACTACGAACACAGGGAAAGGCATTGCCCAGAGGATCCTCCTACTTGTCTCGTCCCACTTCCCAAAGGTTACAGAACGCCCATCGAGTGGCCTAACAGCAGAGATAAGATATGGTACCACAATGTACCACACAAGAAGCTAGCAGAGGTGAAGGGACACCAGAACTGGGTGAAGGTGACCGGAGAGTTCTTGACCTTCCCTGGAGGTGGAACTCAGTTCATTCACGGAGCTCTCCATTACATCGATTTTCTTCAACAGGCTCAACCTTCTATTGGATGGGGAAAGCACACACGGGTGATCTTGGATGTTGGGTGTGGGGTTGGTAGCTTTGGAGGGTTTCTATTCGAAAGGGATGTTATTACAATGTCTTTTGCACCTAAAGACGAACATGAAGCACAAGTGCAGTTTGCCCTTGAAAGAGGAATTCCTGCCATATCTGCTGTTATGGGTTCTCAAAGGCTGCCATTCCCCAGTCTTGTATTTGATGCTATACATTGTGCACGTTGTCGAGTACCTTGGCATGTAGATGGTGGCATGTTGCTGTTGGAACTGAATCGGCTTTTGAGACCAGGTGGTTTATTTATTTGGTGTGCAACTCCTGTGTACCAGAAGCTTGAAGAAGATGTCGAGATATGGAAGGAAATGACCTCCCTGACAAAGTCCATTTGTTGGGAGCTTGTGACCATCAACAAGGATGAACTGAATCGTGTTGGTGCTGCTATTTATCGCAAACCCACTTCCAACGAATGCTACAACCAAAGGGCAAAAAGTGAACCTCCATTGTGCAAGGACGATGATGATCCAAATGCTGCCTGGTATGTGCCTCTGCAGGCATGCTTACACAGGGTGCCTGTGGACAACACTGAGAGAGGAGCCAAATGGCCTGAAACTTGGCCTCGTCGACTAAATAAACCTCCATATTGGTTAAACAACTCGCAGACTGGTATCTATGGAAAACCACCTGCCCAAGATTTTGCAGCAGATACTAATCGTTGGAAAAATGTTGTGGATGAGTTGAGCAACATTGGTATAACTTGGACTGACGTGAGAAATGTCATGGACATGCGATCCATCTACGGGGGATTTGCGGCAGCTCTAAAGGATCTTCCCGTGTGGGTGTTCAATGTGGTGACCGTAGATACTCCGGACACACTTCCTGTCATCTATGAGAGAGGTCTTTTTGGGATATATCATGACTGGTGTGAATCCTTCAGCACGTATCCAAGATCTTATGATCTACTGCATGCAGATAATCTTTTCTCAAAGCTGAAAGATAGGTGCAAACTAACAGCTGTTATGGCAGAGGTTGATAGAATAATTAGACCGGGAGGTAAGTTGATTGTCCGTGATGAACCTTCCACCCTCAGCGAAGTGCGAACTTTGTTAAATTCTCTACATTGGGAAATATTACATGACAAAATAAAAGAGGGTGTACTTTGTGCAAAAAGAGGCAAATGGAGGCCTACGGCTATAGCAGTGTCCTGA 2469 0.4565 MALFKTRKRSSSPSYVSTLTVFVFIALCVFGVWMLSSKSVVPPQTQSDEDIATRTSIDTSTTNDELSASHGMAEKIPETRKDTSSSVFGDNPGQLPDDAIKSDEKHSNMESQNQHIMASMDAQLSEESSLTQKEQASVIHEAGADSDVKITEPEKAQQTVTTASNDIKKDEEIAAAAVEHEEPSIGKQQDVQGFDTKPAEEEINKEQFLEDKGAVEANPKPDVLQQEPETALKGTSSEEVSEKIENPKVDEVEVTQKPKAEKKGRKSKKQWSTQAAQSQKENKRQQVESNSEEKLEDHEWYLCNVTANEDYIPCLDNEKAVKQLRTTRHYEHRERHCPEDPPTCLVPLPKGYRTPIEWPNSRDKIWYHNVPHKKLAEVKGHQNWVKVTGEFLTFPGGGTQFIHGALHYIDFLQQAQPSIGWGKHTRVILDVGCGVGSFGGFLFERDVITMSFAPKDEHEAQVQFALERGIPAISAVMGSQRLPFPSLVFDAIHCARCRVPWHVDGGMLLLELNRLLRPGGLFIWCATPVYQKLEEDVEIWKEMTSLTKSICWELVTINKDELNRVGAAIYRKPTSNECYNQRAKSEPPLCKDDDDPNAAWYVPLQACLHRVPVDNTERGAKWPETWPRRLNKPPYWLNNSQTGIYGKPPAQDFAADTNRWKNVVDELSNIGITWTDVRNVMDMRSIYGGFAAALKDLPVWVFNVVTVDTPDTLPVIYERGLFGIYHDWCESFSTYPRSYDLLHADNLFSKLKDRCKLTAVMAEVDRIIRPGGKLIVRDEPSTLSEVRTLLNSLHWEILHDKIKEGVLCAKRGKWRPTAIAVS 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03004 822 MobiDBLite consensus disorder prediction 111 136 - -
Vimu7g03004 822 MobiDBLite consensus disorder prediction 270 284 - -
Vimu7g03004 822 FunFam probable methyltransferase PMT23 400 584 - -
Vimu7g03004 822 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 310 804 IPR004159 GO:0008168
Vimu7g03004 822 MobiDBLite consensus disorder prediction 165 186 - -
Vimu7g03004 822 MobiDBLite consensus disorder prediction 41 293 - -
Vimu7g03004 822 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 815 IPR004159 GO:0008168
Vimu7g03004 822 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 333 580 IPR029063 -
Vimu7g03004 822 Gene3D Vaccinia Virus protein VP39 412 592 IPR029063 -
Vimu7g03004 822 MobiDBLite consensus disorder prediction 236 260 - -
Vimu7g03004 822 MobiDBLite consensus disorder prediction 41 68 - -
Vimu7g03004 822 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 655 797 IPR029063 -
Vimu7g03004 822 MobiDBLite consensus disorder prediction 194 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03004 Vimu-Chr7 25293484 25296706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03004 - - gmx:100815117 1276.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03004 7 25293484 25296706 Vimu7g03004 7 25293484 25296706 ECH