Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03003 ATGATTGAAAAGAAACAGGTGCTTTCCTTGAGTCTCAGCAACAAAACGACGGTTTTGCTTTGCGTTTTGAGAAATCTGGGGGCACTGCGGCCATCGGAGAGGAGGAAGGAAAGGAACAGTGTATTTGCGAAAGAGAAGGAGAATGATGATGGGGTTAAAGTGGAGTATGGTCGTAACGCCTCTAATTCTGTTTCCGCCTTCGTTCAAAACGCCATCTACTCCAACAGAATCACTGTTTTCTCCAAATCCTATTGCCCCTATTGCTTGCGCGCCAAACGCATACTTGCTCAACTAAATGAGAAACCGTTTGTGGTGGAGCTCGATTTACGAGATGACGGTTATGAAATTCAGAGTGTTATTCTGGATTTGATCGGTCGAAGGACAGTGCCACAAGTATTTGTGAATGGCAAGCATATTGGTGGATCAGATGTGCTGCTGTCCAAAGTGGTGAGTTGCAGAAACTTCTCAGTGCAAGTTGATGGTGTGCTAGAGATTTACGAGCACTAG 507 0.4517 MIEKKQVLSLSLSNKTTVLLCVLRNLGALRPSERRKERNSVFAKEKENDDGVKVEYGRNASNSVSAFVQNAIYSNRITVFSKSYCPYCLRAKRILAQLNEKPFVVELDLRDDGYEIQSVILDLIGRRTVPQVFVNGKHIGGSDVLLSKVVSCRNFSVQVDGVLEIYEH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03003 168 SUPERFAMILY Thioredoxin-like 66 147 IPR036249 -
Vimu7g03003 168 FunFam Glutaredoxin 2 59 154 - -
Vimu7g03003 168 Gene3D Glutaredoxin 54 150 - -
Vimu7g03003 168 CDD GRX_GRXh_1_2_like 76 143 - -
Vimu7g03003 168 Pfam Glutaredoxin 77 139 IPR002109 -
Vimu7g03003 168 ProSiteProfiles Glutaredoxin domain profile. 65 166 - -
Vimu7g03003 168 ProSitePatterns Glutaredoxin active site. 79 95 IPR011767 -
Vimu7g03003 168 PANTHER GLUTAREDOXIN 2 57 145 - -
Vimu7g03003 168 PRINTS Glutaredoxin signature 77 95 IPR014025 -
Vimu7g03003 168 PRINTS Glutaredoxin signature 136 149 IPR014025 -
Vimu7g03003 168 PRINTS Glutaredoxin signature 122 135 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03003 Vimu-Chr7 25291218 25292748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03003 68 147 Miscellaneous Gene Families AT4G15700 31.250 8.59e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03003 K03676 - gmx:100500348 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03003 7 25291218 25292748 Vimu7g03003 7 25291218 25292748 ECH