Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02995 ATGGTTAAGAAGACGGTCTTGAAGGTTGATATCACTTGTGCCAAATGCAAAAGGAAACTCCTCAAGACTGTGTCTTCACTTCAAGGGGTGGATAAAATTGAAGCTGATGAAGGGAAGGGTACGTTGACCGTGACAGGGGATGCAGACCCATACGACATAATAGTTCGCATTAGGAAAGCTGGGAAGCATGCTGAAGTTGTGAGTGTTGGGCCTCCCCCGGCCCCTCCGAAACAAGAACAGAAAAAGCCCGAAGAAAAGAAGAAGCCCGACCCAGTTAAGCAAGAACAAAAACCGAATGAGCCCTGCATGAAGATGCCGTATTACTACCCACCACATCAGCCGGTGGTGGTGTACATGAACAGATACGAGGAGCCCAATCCATCTTGCACTATATTGTAA 399 0.4762 MVKKTVLKVDITCAKCKRKLLKTVSSLQGVDKIEADEGKGTLTVTGDADPYDIIVRIRKAGKHAEVVSVGPPPAPPKQEQKKPEEKKKPDPVKQEQKPNEPCMKMPYYYPPHQPVVVYMNRYEEPNPSCTIL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02995 132 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
Vimu7g02995 132 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 105 - -
Vimu7g02995 132 Pfam Heavy-metal-associated domain 7 63 IPR006121 GO:0046872
Vimu7g02995 132 CDD HMA 6 65 IPR006121 GO:0046872
Vimu7g02995 132 Gene3D - 1 72 - -
Vimu7g02995 132 ProSiteProfiles Heavy-metal-associated domain profile. 2 65 IPR006121 GO:0046872
Vimu7g02995 132 MobiDBLite consensus disorder prediction 78 97 - -
Vimu7g02995 132 MobiDBLite consensus disorder prediction 64 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02995 Vimu-Chr7 25222121 25222616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02995 - - pvu:PHAVU_002G033800g 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02995 7 25222121 25222616 Vimu7g02995 7 25222121 25222616 ECH