Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02994 ATGGAAGTAACACAAGTACTGCACATGAATGGAGGCACCGGAGAAACAAGTTACGCAAGCAACTCCTTGGTTCAGCAGAAGGCAATTTGTTTGACAAGAGTTATGAGAGAGGAAGCGATGAGCAGGCTCTACCGAAGAATGCGACCGAAACGCATAGCAATTGCAGACTTGGGTTGTTCTTCTGGACCGAACACTTTGCTTGTGATGTATGAAGCCATAAAATTGGTGGAGAAGCTTTGTAGAGAACTGAAGCAGGAGTCTCCTGAATACCAGATCTACCTGAATGATCTCCCTGGGAACGATTTCAACAACATTTTCAAGTCCCTTGAGAGCTTCAAAGAGAGACTGAGGAATGATATAGAAGATGAGCATGGGATGGGTTCATGCTTTTTCAATGGAGTTCCCGGCTCTTTTTATGGCAGAATCTTTCCCGACAAAACTCTCCATTTTGTCCATTCCTCCTACAGCCTTATGTGGCTATCTAAGGTTCCTGAAGGTGTAGAGAACAACAAGGGCAACATTTATATGTCCAGCACTAGTCCCTCAAACGTCCTTAAGGCTTATTACGAACAGTATCAGAAGGATCTGTCGTTGTTTCTCAAGTGTCGCGGAGAAGAAATGGTAGAAGGGGGTCGTATGGTTCTCACAATTTTGGGAAGAAGAAGCCATGACCCTTCAAGCAAAGAGTGCTGCTATATATGGGAGCTTTTGGCTAGGGCTCTTAATCATATGGTCTCCAAGGGAATCATAAAAGAAGAGCAAATGGAGGGTTTCAACATCCCTCAATACACACCTTCTCCATCTGAAGTAGAACTTGAGGTTGAAAAGGAAGGTTCATTCAGCATTACTGCTATGGAAGTATCTGCAGTACCTTGGAATGCCTACGATGATTCCGAATATGGTAATTTGTCTGAATCACTCAGAAATGGAGGATACAACGTTGCAAAGTGCATGAGGGCCGTAGCAGAGCCTTTGCTCATAAGTCACTTTGGAGAAGATATCGTTGAAGAGGTTTTTTACCGCTATCAACAGATCTTAACCGAAACAATGTCTGTGGAGAAAAATCATTTTGTTAATGTCACCATATCTTTGATCAGAAAAGCGAGATCAGCATGA 1116 0.431 MEVTQVLHMNGGTGETSYASNSLVQQKAICLTRVMREEAMSRLYRRMRPKRIAIADLGCSSGPNTLLVMYEAIKLVEKLCRELKQESPEYQIYLNDLPGNDFNNIFKSLESFKERLRNDIEDEHGMGSCFFNGVPGSFYGRIFPDKTLHFVHSSYSLMWLSKVPEGVENNKGNIYMSSTSPSNVLKAYYEQYQKDLSLFLKCRGEEMVEGGRMVLTILGRRSHDPSSKECCYIWELLARALNHMVSKGIIKEEQMEGFNIPQYTPSPSEVELEVEKEGSFSITAMEVSAVPWNAYDDSEYGNLSESLRNGGYNVAKCMRAVAEPLLISHFGEDIVEEVFYRYQQILTETMSVEKNHFVNVTISLIRKARSA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02994 371 Pfam SAM dependent carboxyl methyltransferase 39 366 IPR005299 GO:0008168
Vimu7g02994 371 Gene3D - 6 353 IPR042086 -
Vimu7g02994 371 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 352 IPR005299 GO:0008168
Vimu7g02994 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 367 IPR029063 -
Vimu7g02994 371 Gene3D Vaccinia Virus protein VP39 21 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02994 Vimu-Chr7 25211538 25214871 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02994 K21483 - gmx:100815647 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02994 7 25211538 25214871 Vimu7g02994 7 25211538 25214871 ECH