Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02956 ATGGTTAACGTTGTGACAGCATATGGTTGGTTGTTGCATTGGCTAGTGAGGGCGGTGGGGTTGACACCTTATATGGTGGAGATAGAGCCAGGGACGGTTATAAAATTCTGGGGGCCATGCGACGCCGTTTCGACCGGCAAACGCCTTTCTTCCAAACCAGTGGTGGTTCTCCTGCACGGCTTCTGCGGCGACGGAATCATCAACTGGCAGTGTCAGGTAGCAGCTTTGACGAGAGACTACGCGGTCTATGTGCCGGACCTTCTCTTCTTCGGTGGATCCGTCACCGATAAGGCGGAACGGTCGCCGGAGTTTCAAGCGGAGTGTTTGGCGGCAGGGTTGGGGAAGCTCGGGGTGGAGAAGTGCGTTTTGGTTGGGTTCAGTTACGGAGGGTTTGTGGCGTTGAAAATGGCTGAGATGTACGTTGAGATGGTGGAGGGTGCAGTGGTGTCTGGCGCCGTTGTGGCTATTACGGAGAACGTAGTTTTGAGAGCAGTGGAAGGGATTGGGTATTCGTCGTGTTCGGAGATGTTGTTGCCGGTGTCCGTTGGGGAACTGAAGACCCTTCTTTCCGTTGCTTGTTACAGAAACCTCTCCTTACCCAACCGTTTCTACGCAGACTTCTTACAGGCAATGTACTCAAATAGGAAGGAGCGAGCTGAGCTGTTGGAGGCCTTAGTAATTAGCTACAAAGAGATTAAAATCCCAAAATTTCACCAGCGAATACATCTTCTATGGGGTGAGGATGACAAAATTTTTAAACTAGAGTTTGCGCAGAAAATGAAAGAGAAGGTGGGAAATAATGCAACATATGAAGGCATAAAGAATGCGGGTCACCTGGTTCACCTGGAGCGACCCTGGGTCTATAATAAGAGCCTCAAGCAATTTCTTTCCTCTGTTTTTCCATTGCCAGGTGCCAAAAACTGA 924 0.5 MVNVVTAYGWLLHWLVRAVGLTPYMVEIEPGTVIKFWGPCDAVSTGKRLSSKPVVVLLHGFCGDGIINWQCQVAALTRDYAVYVPDLLFFGGSVTDKAERSPEFQAECLAAGLGKLGVEKCVLVGFSYGGFVALKMAEMYVEMVEGAVVSGAVVAITENVVLRAVEGIGYSSCSEMLLPVSVGELKTLLSVACYRNLSLPNRFYADFLQAMYSNRKERAELLEALVISYKEIKIPKFHQRIHLLWGEDDKIFKLEFAQKMKEKVGNNATYEGIKNAGHLVHLERPWVYNKSLKQFLSSVFPLPGAKN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02956 307 Gene3D alpha/beta hydrolase 41 299 IPR029058 -
Vimu7g02956 307 PRINTS Alpha/beta hydrolase fold signature 123 136 IPR000073 -
Vimu7g02956 307 PRINTS Alpha/beta hydrolase fold signature 79 94 IPR000073 -
Vimu7g02956 307 PRINTS Alpha/beta hydrolase fold signature 241 255 IPR000073 -
Vimu7g02956 307 PANTHER SI:DKEY-122A22.2 1 297 - -
Vimu7g02956 307 Pfam alpha/beta hydrolase fold 53 159 IPR000073 -
Vimu7g02956 307 SUPERFAMILY alpha/beta-Hydrolases 51 298 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02956 Vimu-Chr7 24890765 24895854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02956 - - pvu:PHAVU_002G030900g 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02956 7 24890765 24895854 Vimu7g02956 7 24890765 24895854 ECH
Vimu7g02956 7 24890765 24895854 Vimu7g02956 7 24890765 24895854 PCT