Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02952 ATGGAGGCCGACGCTATGGCCATGGAATCAACGGAGTTAAAGGTGTCGGAACTATTGAAAGAGGTCAACGTAGATTACTCTCCTCAGTTTAGTAAGCTCGTTGACAACACCGTTTCCGCCATCAAAGCCTCCATAGACAAAATCCCCAACGATTTCAAGGTAACTGCAGATTTAGCATCGCGGTTTGTTGCGGACATTGGCGCCGATAAGGTCGAGTTTAAGTTTAAGAAGCCAGAGTTTATTAAGACTGGTGGGAGTTACTCCACACAGAGTATTGCGAGGCCTGAAGTTAATGTTGATCTTATTATCAGGTTACCAAAGGAATGCTTCCACGAGAAGGATTATTTAAATTACAGATACTATGCCAAGAGGTGTTTGTATTTATGTTTGATAAAGAAGTATTTGGAGAGATGTTCATCTATTGATAGGGTCGAATGGTCCACTATGCAGAATGAAGCCAGAAAACCCTTGCTCATTGTGTATCCAGCTGCGAAGCTTGTTGAAGTTCCTGGTTTTTTTGTAAGAATTATTCCGTCCGCGAAGGCTATATTTAGCATAGCGAAGTTGAACATGAAGCGCAACAATATTCATAACCTGAGTAATGGGATTGATCTTCAGGCTACACCGAAGTACAATTCTAGTATTCTGGAAGACATGTTTATAGAGGATGCTGAATTCGTGAGCAAGTATTTTGTTGGATGGAAGGAACTAAAGGAGGCTTTAATCCTGCTTAAGGTTTGGGCCCGGCAAAGAAGTTCAGTATATGTTCATGATTGCCTGAATGGGTTTTTGATTTCTGTCATACTGGCATACCTGGCTTCTAAGCAGCATATTAGCAATTCAATGAAGGCTACTGAAATAATCCGCGTCACCTTGAACTTCATTGCAACCTCAGAGTCGTGGAACCGAGGGTTATACTTTCCAAAGGAAGGCCAGATCCATATTACGAAGGAGCAAAAGATTCAACTTAGAGATTCATTTCCAATTCTCATATGTCATCCATCTGGAGGATTCAATGTAGCTTTCCGAATGTCTAGGATTGGTTTTACTCGGCTTCAAGAAGAGGCTGCTATGACACTTAGGTGCTTAGAAAAGTGTAGAGATGGTGGATTTGAGGAAGTTTTTATGACCAAGATTGACTATGCTGTTAAGTATGACTATTGTATGAGCTTTGCCTCTTTGATAGGTAGAGGGTTGAGTGGTGAACTTGCCCAACCTAACCCAAATTTGTGGGTTGGATTGGGTCAACAGGGAAAGAAGGAGGTATTTGCATTGGGATTTTGTTTGGATGATGAGTGCTGGAGAGCATACGAGGATAAAATACATGGTATTTTATCTAAAGGGTTAAATGATAGAGCAAGAGCCATTCAAGTTACATGGAGGAATACACAATGCCAGTGGAGTGTGGACGATGGCTTGTCGGTATTTGATAAAGAGCCCTTATTCATCGGAATTTCAGTGAGTACTTTGGAGAAAGCATATAGGATGGTTGATATTGGCCCAAATGCTGAAAGTAAAGAAGAGGCTCTTGAATTTCAAAAGTTTTGGGGAGAGAAAGCAGAGCTTCGAAGATTTAAAGATGGTAGAATTGCAGAAAGCACAGTATGGGAAAGTGAGCAATGGGCTAGATATCTTATTTTGAAAAGAATAGCAGAGCATGTACTTAGTCGACATCTTTCTCTATCCAAGGAAGATATTGTAGTTGTTGTGGATCAACTTGATTTCTCTTTGATTCACAGTGCTGGAGGTAATGATCTTTATCCTATATCATACGCTGGTAGTTTGCTTGGGGCATTTGATGTTTTATCAAAGCGCTTGCGTCTTATTGAAGACCTTCCATTGAAGGTGTCCAGTGTACTGCCTTTAGACTCTGCTTTTAGGTATACATCAGTGTTTCCTCCGGAACCTCATCTTCTAGCTAATGAAAAAATTGAATCTCTGAGATTGAATAAGTTTGTTCCATCATGCATTCAAGCACTGGAAGTTGTGATTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAATTGCAATTGAAAAAACAAAATCTAGCTTCCTTTTTCAAATTGGATTGAGTCTTCAAAAGAAGTGGGGGATGACATGCACTGCCACTGAGGATAATGTGGACGTACTAATGTCAGGATATGCTTTCCGTCTAAAAATTTTGCATGAGAGAGGCCTTAGTTTGCTAAAAAAGGAAGTTGGGGATGTTCAGGCTAAGCAAGTTTCTTCCATTGACAAGAACCTTCTTATCCGTAGTCAACATGCTAATATGATCAATGGATTACAAAGTCGTTATCCAATATTTGGACCAGTAGCTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCAGCTTGCTTGGTAGAAGAGGCTGTCGAACTATTGGTTGCATATCTTTTTCTTAATCCTTTGCCATTTGATGTTCCCTGTTCACGGATCACTGGGTTTTTGAGGTTCCTGCGATTACTCTCAAACTATGATTGGACTTTCTCTCCATTGGTTGTTGACATAAATAATGACTTGAGCCAAAGTGACGAGAAAGAAATAAATGACAACTTTTTGGTAAGAAGAAAAAGTCAGGGTGAGAGTGGACAAAGTGTAGGACCAGCAATGTTCTTAGCTACAGTTTACGATAAAGAATCTGAGGCTTGGACTGGATTATCACCTAGTGGAATGGAACTGAGAAGGTTAGTTGCATATGCCCGAAGCAGTGCCAATTTGCTGACAAAACTCACATTTCAAGAAGAGTTTGGTCCATACCGATGGGAGTGCCTTTTCAGGACTCCTTTAAACAATTATGATGCAGTAATTCTTCTCCACAAGGACAATCTCCCGTATCCCCAAAGGCTTCTCTTCCCTTCAGAAGTTAATCATGGAATACATGTTGCAGAAGGACAAGCCAGCAAGTGTTTTCAACCCTTTTTGTTGCCTAAAGATTTGAAGGGCAGGCCAGAGGAACTTAAAAATAAGTTGCTGGTGGATTTTGATCCATCAAAGTGCTTTATCAGAGATTTAAAGGCAACCTCATTCCAAGTATGGCATGATTATCTGGGAGGCGATATTATTGGCCTAACATGGGGGGAATCATATTCTTCCAAGAAGCGAAAGCACGTGGAAGTGGTTGATGAAGAATATAATCCTTTGAAGGTGTTAAAAGCAGTGGGGGAAATTGGGAAAGGATTTGTGAGGAGTGTATACTTTCTCAAGCCCCCAAGGCTCAGGGATTAG 3237 0.4081 MEADAMAMESTELKVSELLKEVNVDYSPQFSKLVDNTVSAIKASIDKIPNDFKVTADLASRFVADIGADKVEFKFKKPEFIKTGGSYSTQSIARPEVNVDLIIRLPKECFHEKDYLNYRYYAKRCLYLCLIKKYLERCSSIDRVEWSTMQNEARKPLLIVYPAAKLVEVPGFFVRIIPSAKAIFSIAKLNMKRNNIHNLSNGIDLQATPKYNSSILEDMFIEDAEFVSKYFVGWKELKEALILLKVWARQRSSVYVHDCLNGFLISVILAYLASKQHISNSMKATEIIRVTLNFIATSESWNRGLYFPKEGQIHITKEQKIQLRDSFPILICHPSGGFNVAFRMSRIGFTRLQEEAAMTLRCLEKCRDGGFEEVFMTKIDYAVKYDYCMSFASLIGRGLSGELAQPNPNLWVGLGQQGKKEVFALGFCLDDECWRAYEDKIHGILSKGLNDRARAIQVTWRNTQCQWSVDDGLSVFDKEPLFIGISVSTLEKAYRMVDIGPNAESKEEALEFQKFWGEKAELRRFKDGRIAESTVWESEQWARYLILKRIAEHVLSRHLSLSKEDIVVVVDQLDFSLIHSAGGNDLYPISYAGSLLGAFDVLSKRLRLIEDLPLKVSSVLPLDSAFRYTSVFPPEPHLLANEKIESLRLNKFVPSCIQALEVVIQLEGSGNWPMDEIAIEKTKSSFLFQIGLSLQKKWGMTCTATEDNVDVLMSGYAFRLKILHERGLSLLKKEVGDVQAKQVSSIDKNLLIRSQHANMINGLQSRYPIFGPVARLAKRWAASHLFSACLVEEAVELLVAYLFLNPLPFDVPCSRITGFLRFLRLLSNYDWTFSPLVVDINNDLSQSDEKEINDNFLVRRKSQGESGQSVGPAMFLATVYDKESEAWTGLSPSGMELRRLVAYARSSANLLTKLTFQEEFGPYRWECLFRTPLNNYDAVILLHKDNLPYPQRLLFPSEVNHGIHVAEGQASKCFQPFLLPKDLKGRPEELKNKLLVDFDPSKCFIRDLKATSFQVWHDYLGGDIIGLTWGESYSSKKRKHVEVVDEEYNPLKVLKAVGEIGKGFVRSVYFLKPPRLRD 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02952 1078 Pfam Nrap protein domain 6 933 1068 IPR035371 -
Vimu7g02952 1078 Pfam Nrap protein PAP/OAS-like domain 237 378 IPR035367 -
Vimu7g02952 1078 FunFam Nucleolar protein 6 211 381 - -
Vimu7g02952 1078 Pfam Nrap protein domain 3 433 560 IPR035368 -
Vimu7g02952 1078 Pfam Nrap protein PAP/OAS1-like domain 5 767 919 IPR035370 -
Vimu7g02952 1078 Gene3D - 209 381 - -
Vimu7g02952 1078 Pfam Nrap protein domain 1 99 223 IPR035082 -
Vimu7g02952 1078 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 4 1069 IPR005554 -
Vimu7g02952 1078 Pfam Nrap protein nucleotidyltransferase domain 4 593 764 IPR035369 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02952 K14544 - gmx:100776157 1845.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02952 7 24853432 24862483 Vimu7g02952 7 24853432 24862483 ECH