Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02951 ATGGGTCTTCTGAGCATCATTAGAAAAATCAAGCGGAAAGAGAAGGAAATGCGGATTTTGATGGTCGGATTGGACAATTCGGGGAAAACTACAATAGTTTTGAAGATAAACGGAGAGGACACTAGCGTCATCAGTCCCACGCTTGGCTTCAACATCAAAACCATTGCTTACCAAAAGTACACCCTAAATATATGGGATGTTGGGGGGCAGAAAACAATAAGATCTTACTGGAGAAATTACTTTGAGCAAACAGATGGGTTGGTTTGGGTGGTTGACAGTTCAGATCTGAGAAGGTTGGATGATTGCAAGTTGGAGTTGGATAACCTTCTCAAGGAAGAGAGGCTGTCTGGAGCATCTTTACTGATATTAGCAAATAAACAGGACATAAAAGGTGCCCTTACACCTGAAGAAATAGCTAAGGTGCTGAACTTGGAAGCCATGGATAAATCTCGGCATTGGCAGATAGTTGGCTGTAGCGCATACACTGGAGGGGATGGGTTAGTGTCTGTAAAATTGATATTGGATTTTGAAGCAGCAAGATACTTGATTACTTGGAGGTAA 561 0.4207 MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIAYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKLELDNLLKEERLSGASLLILANKQDIKGALTPEEIAKVLNLEAMDKSRHWQIVGCSAYTGGDGLVSVKLILDFEAARYLITWR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02951 186 NCBIfam small GTP-binding protein domain 15 149 IPR005225 GO:0005525
Vimu7g02951 186 CDD Arl2 3 169 IPR045873 GO:0003924
Vimu7g02951 186 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED 1 164 IPR044612 GO:0003924
Vimu7g02951 186 Gene3D - 5 177 IPR027417 -
Vimu7g02951 186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 163 IPR027417 -
Vimu7g02951 186 SMART sar_sub_1 3 186 IPR006689 GO:0003924|GO:0005525
Vimu7g02951 186 Pfam ADP-ribosylation factor family 4 164 IPR006689 GO:0003924|GO:0005525
Vimu7g02951 186 FunFam ADP-ribosylation factor-like 2, arl2 4 182 - -
Vimu7g02951 186 PRINTS GTP-binding SAR1 protein signature 46 70 IPR006689 GO:0003924|GO:0005525
Vimu7g02951 186 PRINTS GTP-binding SAR1 protein signature 73 98 IPR006689 GO:0003924|GO:0005525
Vimu7g02951 186 PRINTS GTP-binding SAR1 protein signature 18 41 IPR006689 GO:0003924|GO:0005525
Vimu7g02951 186 PRINTS GTP-binding SAR1 protein signature 118 139 IPR006689 GO:0003924|GO:0005525
Vimu7g02951 186 ProSiteProfiles small GTPase Arf family profile. 10 186 - -
Vimu7g02951 186 SMART arf_sub_2 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02951 Vimu-Chr7 24849359 24851471 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02951 K07943 - gmx:100305563 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02951 7 24849359 24851471 Vimu7g02951 7 24849359 24851471 ECH