Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02948 ATGACGCTGGGTCTGATCAATGCAAACCCCGTGGTTCACGCCAAGAAGGAGCGAATCGCTCGTTCCGAAGATCCTCACGCCATCCTTGACTTCGCTTTGACAAATTTCGTGAGGGATATTCGGGATCCCGAACATCCTTATTCCTTGGAACAGCTCAGTGTTCTCTCCGAGGAATCAATCACCGTCGATGACAAATTAGGCCGTATTCTGATAACTTTTACGCCGACCGTTCAGCACTGTAGCATGGCCACTGTTATTGGTCTCTGCCTGAGAGTGAAACTGAAGCACTATTTTCCTCCTCATTACAAAGTTTGTTCCCTGCTATTCATTTTCGCTTCTGCATGTTTTTGCTTTTCTCAATTATTGATCTATACTGTTATGAGGCTGGTTGCCACATGCCACCATTTCATAACACTTCCTGAGACCACTGCGCCATTTTCCGCCAAACCTGTTTGCAGTGAAGTGGACATCAAGGTTTCTCCTGGATCTCATGCTGACGAAGAATCAGTCAACAAGCAGTTAAATGATAAAGAAAGAGTTGCTGCTGCCTTGGAGAATCCCAACCTCCGCCAGCTTGTGGATGAGTGCCTCTACTCCAATGAACTGTGA 609 0.4647 MTLGLINANPVVHAKKERIARSEDPHAILDFALTNFVRDIRDPEHPYSLEQLSVLSEESITVDDKLGRILITFTPTVQHCSMATVIGLCLRVKLKHYFPPHYKVCSLLFIFASACFCFSQLLIYTVMRLVATCHHFITLPETTAPFSAKPVCSEVDIKVSPGSHADEESVNKQLNDKERVAAALENPNLRQLVDECLYSNEL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02948 202 Gene3D - 167 197 - -
Vimu7g02948 202 Pfam Iron-sulfur cluster assembly protein 38 96 IPR002744 -
Vimu7g02948 202 Gene3D - 26 108 IPR034904 -
Vimu7g02948 202 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 33 98 IPR034904 -
Vimu7g02948 202 PANTHER UNCHARACTERIZED 153 200 IPR039796 GO:0106035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02948 Vimu-Chr7 24828167 24830592 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02948 K26403 - cpap:110822403 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02948 7 24828167 24830592 Vimu7g02948 7 24828167 24830592 ECH