Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02940 ATGGCTACATTAGTGAAACGCAAGACTTGTTCAATTGTTGCAGCAACATGGCTCGTCTTATGTATTCTTACTATGATCTGCAGTGTCAGTTTAGCAGATAGAATGTTGAAAGAAAAAGAAATGGGAAATGATGGTAAGAAAGAGAGACAAGGAGTGCTGAAAGCCATTGCAAATTTCTTGTGGGAGGAGGGAAAGTCTTCCTATGAACCTGTTTGGCCGAACATGAAATTTGGTTGGAGAATTATAGTAGGATCCATCATTGGATTTTCTGGAGCTGCATTGGGAAGCGTTGGAGGCGTAGGAGGTGGAGGAATTTTTGTTCCTATGCTTGCTTTGATCATTGGCTTTGATCCCAAGTCTTCAACGGCCATTTCTAAGTGTATGATAATGGGTGCATCAATATCAACTGTGTACTATAATTTGAGGCTCAGACACCCAACACTGGACATGCCGCTTATAGACTATGACCTGGCTTTGATTTTCCAGCCTATGCTCATGTTAGGAATAAGCATTGGCGTTATATGTAATGTCATGTTTGCTGATTGGATGGTGACAGTTTTGCTTATCATCTTATTCGTAGCCACATCAACAAAAGCTACATACAAAGGCATAGACACATGGAAAAAGGAAACAATTGCAAAGAAGGAAGCATCTAAACTGCTACAGGCAGAACCAGAACCTGGTGATGACTACAAGTCAATACCAAGTGGTCCAACTAATTCACTATTTGAGGAGGCCCCTCTACTAAAAAACATATATTGGAAAGAACTATCACTCCTCATGTATGTCTGGGTGGCCTTTTTCATTGTTCAGATTGTTAAGGAATACAGCAAGCCCTGCTCCATCCAGTTCTGGGTTGTTAATTTCTTGCAGGTTCCTATTGCAATCTCTGTTACACTTTTTGAAGCCATAGGCTTGTACAAGGGAACGAGAGTGATTGCATCAAAGGGAAAGGAAATAACCCATTGGAAGATTCATCAGATCTGTCTGTACTGTTCCACTGGAATAATGGCTGGTATGGTTGGTGGACTGCTTGGTCTAGGAGGCGGGTTCATTTTGGGACCATTGTTTCTAGAATTGGGAATTCCTCCTCAGGTAGCAAGTGCTACATCAACTTTTTCAATGGTTTTTTCATCCTCCATGTCAGTGGTGCAATACTACTTGTTAGATCGTTTCCCAGTACCGTATGCTTCCTACTTTGCTCTGGTTGCAACCTTAGCTGCCTTCGCTGGTCAGCATGTGGTGAGAAAGATAATTATAGTTCTTGGGCGAGCATCCATTATCATCTTCATACTAGCATTGACCATTTTCATCAGCGCACTGAGTTTAGGTGGAGTGGGAATAGAGAACATAATTGAGAAGATAGAAAAACATGAGTATATGGGCTTTGAAGATCTCTGTGCGTCTTATTAG 1413 0.4147 MATLVKRKTCSIVAATWLVLCILTMICSVSLADRMLKEKEMGNDGKKERQGVLKAIANFLWEEGKSSYEPVWPNMKFGWRIIVGSIIGFSGAALGSVGGVGGGGIFVPMLALIIGFDPKSSTAISKCMIMGASISTVYYNLRLRHPTLDMPLIDYDLALIFQPMLMLGISIGVICNVMFADWMVTVLLIILFVATSTKATYKGIDTWKKETIAKKEASKLLQAEPEPGDDYKSIPSGPTNSLFEEAPLLKNIYWKELSLLMYVWVAFFIVQIVKEYSKPCSIQFWVVNFLQVPIAISVTLFEAIGLYKGTRVIASKGKEITHWKIHQICLYCSTGIMAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFSMVFSSSMSVVQYYLLDRFPVPYASYFALVATLAAFAGQHVVRKIIIVLGRASIIIFILALTIFISALSLGGVGIENIIEKIEKHEYMGFEDLCASY 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02940 470 PANTHER CEREBLON 34 467 - -
Vimu7g02940 470 Pfam Sulfite exporter TauE/SafE 40 196 IPR002781 GO:0016020
Vimu7g02940 470 Pfam Sulfite exporter TauE/SafE 334 438 IPR002781 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02940 Vimu-Chr7 24751384 24754825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02940 - - gmx:100801441 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02940 7 24751384 24754825 Vimu7g02940 7 24751384 24754825 ECH
Vimu7g02940 7 24751384 24754825 Vimu7g02940 7 24751384 24754825 PCT