Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02924 ATGATACCTGGCATTTTCTCAAGGCCGAATGCTACCATTTATTGTCGCATTAGGGAAGCATTGACTCGGCAACAAGGGGTACCGGCATCCCTGTATAGAAGTTCAGGCTTGTCTCTTCGTTCACTGTATTCAACTTTCTTTTTGTCCGGTTCAACTCATTGCTCCTCAAGCCACACACTTATCACAAAATCAATGACTACTGCCTTCCATTGCAATGCTTTGCTGGGAGGTGTTTATGTTAACGGTTTAATCTCAGGTTGTGATAGCGTGCTAGACTTCACAAAGCCTGCTGTTGTGTACTTAAAAGACAAAACTTTTAAAGGCTGCCTAAGGGGTAGCGGAAATCTAAGGAGACCACAACCTTCGTTTGGTTCTTTGAGTTTTGGTAGTTCTACTTTTGATGGTAATTGGAGGATCCGGGATTCCAGTTTGCTTCATGGATCATGGCTCAAGAGTTTCTCTACCTCTTCTTCTGCCTGCCCATCAGCTGGGGCTGCTCGTGCTGTCTCTTTTGATGGCAGCCCTCCCGATGAACAGCTTGCAAATTCCTCTTTTTCACCTGACGAAACTACTGTTGGTGGCAAGACCTTGAAGATGTTGTCAGGATCATGTTATCTACCGCATCCAGATAAGGAGGAGACAGGAGGAGAGGATGCTCATTTTATTTGCGCAGATGAACATGCAATTGGTGTTGCTGATGGTGTAGGTGGCTGGGCCGACGTTGGTGTTAATTCAGGACTGTTTTCCCGGGAACTTATATCCAATTCAGTGAGAGCAATTCAAGAGGAGCCTCAAGGTTCTTTTAATCCAACAAGGGTGTTAGAGAAGGCTCATTCAAATACAAAGGCTAAGGGTTCATCAACAGCTTGTATTGTTGCCCTTACTGATAAGGGACTACATGCTATTAATTTGGGCGACAGTGGATTTATTGTGGTTAGAGATGGATGCACTATTTTCCAGTCCCCTGTTCAACAACATGACTTCAATTTCACATATCAGTTGGAGAGTGGCAATGGAGGTGATCTACCCAGCTCTGCGGAGGTTTTTACCATACCCGTTGCTTCTGGAGATGTAGTCATTGCTGGAACAGATGGCTTATTTGACAATCTGTACAATAGTGAGATCACTGCAGTTGTTGTACATGCAATTAGGGCTGGACTAGAGCCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCGCTGGATCCGAGCAGGCCGACACCATTTTCTACTGCTGCTCAGGAGGCTGGCTTCCGTTATTATGGTGGCAAACTTGATGACATAACTGTTGTTGTCTCATACATATCTGGCTCACTTAGCGAGTGA 1338 0.4544 MIPGIFSRPNATIYCRIREALTRQQGVPASLYRSSGLSLRSLYSTFFLSGSTHCSSSHTLITKSMTTAFHCNALLGGVYVNGLISGCDSVLDFTKPAVVYLKDKTFKGCLRGSGNLRRPQPSFGSLSFGSSTFDGNWRIRDSSLLHGSWLKSFSTSSSACPSAGAARAVSFDGSPPDEQLANSSFSPDETTVGGKTLKMLSGSCYLPHPDKEETGGEDAHFICADEHAIGVADGVGGWADVGVNSGLFSRELISNSVRAIQEEPQGSFNPTRVLEKAHSNTKAKGSSTACIVALTDKGLHAINLGDSGFIVVRDGCTIFQSPVQQHDFNFTYQLESGNGGDLPSSAEVFTIPVASGDVVIAGTDGLFDNLYNSEITAVVVHAIRAGLEPQVTAQKIAALARQRALDPSRPTPFSTAAQEAGFRYYGGKLDDITVVVSYISGSLSE 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02924 445 ProSiteProfiles PPM-type phosphatase domain profile. 200 439 IPR001932 -
Vimu7g02924 445 Pfam Stage II sporulation protein E (SpoIIE) 227 437 IPR001932 -
Vimu7g02924 445 SUPERFAMILY PP2C-like 203 437 IPR036457 -
Vimu7g02924 445 SMART PP2C_4 190 437 IPR001932 -
Vimu7g02924 445 MobiDBLite consensus disorder prediction 176 191 - -
Vimu7g02924 445 Gene3D - 209 335 IPR036457 -
Vimu7g02924 445 PANTHER PROTEIN PHOSPHATASE 2C 180 439 IPR039123 -
Vimu7g02924 445 SMART PP2C_SIG_2 212 439 IPR001932 -
Vimu7g02924 445 MobiDBLite consensus disorder prediction 168 192 - -
Vimu7g02924 445 Gene3D - 336 444 IPR036457 -
Vimu7g02924 445 FunFam 5-azacytidine resistance protein azr1 208 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02924 Vimu-Chr7 24616452 24619225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02924 K17508 - gmx:100785804 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02924 7 24616452 24619225 Vimu7g02924 7 24616452 24619225 ECH
Vimu7g02924 7 24616452 24619225 Vimu7g02924 7 24616452 24619225 PCT