Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02923 ATGTTAACAATGGAGCCTCAGAGAAAAGCTTTGGCATTATCTTGGATCTTGATCTTCTTCCTTTCCATTTCCCTGTGTGGGGTGAAGGCATCAAGTGAAGGGCACCATGGCGAGCCTCAAGAGGGACCTCTGGTGAAGAAGGATCAGAGGACGACATTACTTGCCACTGAGTTCGGACAGATAACCGCCCTTGACATCAAGGAAGAACCAGATAAACTTCCTTACCATCTTCAGTTCATCACATTGGAGCCAAACTCGCTATTTCTTCCTGTGCTTCTACATGCAGACATGGTCTTTTATGTTCATACAGGGAGTGGAAAGCTGACTTGGGCATATGATGATGATACTGGCACGATCCCTTTACGCGAAGGAGATGTCTGTAATCTCAATGAAGGATCTGTTTTCTATATACAGAGCGACTTAGAGGCTGAGAGAAGGAAACTCAGGATCTATGCAATGTTAACCAATACAGAAGACAATACTTATAATCCATCAATCGGTGCTTACTCAAGAATCGACCAACTGGTCAAGGGCTTTGATAAGAGAATCATGCAAGCAGCTTTAAAGGTACCAGATGATTTGATAGAAGAAATCATCAACAAGAAAAATACCCCTGCTGTAGTGCATGCGGATTCAGAAAAGACGAATATTGTCAAGACACTGGAGGCTTCGTTTCTTAAAAATTTTCTGGGTGTCGGGTCCAGCTCCAATACACTCGAAAAATATAACATCCTTGATCATGAACCTGGCTTCAAAAATCGTTATGGTAGGAGCGTAGCAGTATCCAAAACGCAACTAAAGTCATTGAAGCGAACGAACATTGGATTTCTTATGGTGCATTTGAACGAGGGATCAATAATGGGGCCTCATTGGAACCCGAAGGCAGCAGAGTTGGCAGTGGCAGTAGCAGGGAAAGGCATGGTCCAAGTGGTAAACGGAAGCAGCAATGAAGGTGATACAGTAAGACAAAGCATGAGGTTTAAGGTTAACGCGGGTGATGCTTTTGTGGTGCCTAGGTTTCATTCAATGGCTCAGATGGCATTCAACGATGAACCGTTTGTTTTTCTGGGCTTCAGCACTTCAGCGAAGGACAACCATCCTCAATTTTTTACGGGAAAGGGATCTGTCCTTCACAATCTGGACAAGCATATACTGGCTACCTCTTTGGGTGTGAGTGACAGAACCGTCGACGAACTTAGGCGTTCTTCCAGAGGTTCCATCATTTTCGCGTGCTCTTCCTGCGCAGAGGAAGAGGAGAGTACAATGAAGGAAGAAGAAAGGGAGAGGAAGGAGGAAGAAAGTGAGAGAAAAAGAGAAGAGGAGGAGGAGAGAAAAAGAGAAGAGGAGGAGGAGGAGAGAGAGAGAGAGAGAAAGAGGGAGAGAGAGGAAGAGGAAGCCAAAAGACAACAAGAAGAGAGGGAAAAGAAGCGTGAGGAGGAGGAAGAGAGGGAGCAAGAAGAAGGTGGGAGAGAGAAAAAAAGGGAAAGGGAAGAAGAGAGGGCGAGGGAGGAAGAAGAAGCTAAAAGGCAACAGGAGAAGAGGGAAAAGAAAAGAGAGAAAGAAAAAGGAGAAGAAGCAGCCGCACAGAAGGAGCAAGAACAAGCTAAAAGAGAGCAAGAAAAGAGAGAAAAGAAGCGACAGGAGGAGGAACAAAGCGAAGGGAAAGAAGACGATCCGACATGGTGGGAGAGACCGAGGAGAGAGAAGGGGAAAGGATCAGAAGAAGAAGTAGCAGAACAGGAGCAAGAACAAGCCAAAAGACAACAAGAAGAAAGGGAGAAAAGAAGAGAGCATGAGAGTGATCCTGATCACTTTGAAGGAAGGAGAGCTTTGAAAATCAGAAACCTTTGA 1851 0.4516 MLTMEPQRKALALSWILIFFLSISLCGVKASSEGHHGEPQEGPLVKKDQRTTLLATEFGQITALDIKEEPDKLPYHLQFITLEPNSLFLPVLLHADMVFYVHTGSGKLTWAYDDDTGTIPLREGDVCNLNEGSVFYIQSDLEAERRKLRIYAMLTNTEDNTYNPSIGAYSRIDQLVKGFDKRIMQAALKVPDDLIEEIINKKNTPAVVHADSEKTNIVKTLEASFLKNFLGVGSSSNTLEKYNILDHEPGFKNRYGRSVAVSKTQLKSLKRTNIGFLMVHLNEGSIMGPHWNPKAAELAVAVAGKGMVQVVNGSSNEGDTVRQSMRFKVNAGDAFVVPRFHSMAQMAFNDEPFVFLGFSTSAKDNHPQFFTGKGSVLHNLDKHILATSLGVSDRTVDELRRSSRGSIIFACSSCAEEEESTMKEEERERKEEESERKREEEEERKREEEEEERERERKREREEEEAKRQQEEREKKREEEEEREQEEGGREKKREREEERAREEEEAKRQQEKREKKREKEKGEEAAAQKEQEQAKREQEKREKKRQEEEQSEGKEDDPTWWERPRREKGKGSEEEVAEQEQEQAKRQQEEREKRREHESDPDHFEGRRALKIRNL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02923 616 Pfam Cupin 242 396 IPR006045 -
Vimu7g02923 616 Coils Coil 571 598 - -
Vimu7g02923 616 Coils Coil 415 558 - -
Vimu7g02923 616 CDD cupin_7S_vicilin-like_C 249 406 - -
Vimu7g02923 616 MobiDBLite consensus disorder prediction 414 616 - -
Vimu7g02923 616 MobiDBLite consensus disorder prediction 417 616 - -
Vimu7g02923 616 PANTHER OS03G0336100 PROTEIN-RELATED 14 414 - -
Vimu7g02923 616 Gene3D Jelly Rolls 38 221 IPR014710 -
Vimu7g02923 616 Gene3D Jelly Rolls 233 414 IPR014710 -
Vimu7g02923 616 CDD cupin_7S_vicilin-like_N 53 214 - -
Vimu7g02923 616 SMART Cupin_1_3 242 397 IPR006045 -
Vimu7g02923 616 SUPERFAMILY RmlC-like cupins 7 402 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02923 Vimu-Chr7 24612967 24615347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02923 9 422 Miscellaneous Gene Families AT2G18540 41.270 1.57e-102 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02923 - - vum:124824391 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02923 7 24612967 24615347 Vimu7g02923 7 24612967 24615347 ECH