Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02913 ATGGAAGACACACTTTCAGGGTTGAGGTCTTTGATGGCTACTCACTCACCTCCACTCGATGCCTTAGTTGTACCCTCTGAAGATTATCACCAGAGCGAATACGTATCTGCACGAGACAAGCGCCGCGAATTCGTTTCCGGCTTCACTGGAAGCGCTGGCTTAGCACTCGTAACAAAGAACGAAGCGCTACTTTGGACGGATGGAAGATATTTTTTGCAGGCTAGCCAAGAGCTCAGTGCTCAATGGAAGCTAATGCGTATTGGTGAAGATCCTGCTGTAGATATCTGGATAGCTGATAACTTGCCAAAAGAGGCATTTATTGGGGTTGACCCTTGGTGCATTTCAATTGATACTGCTCAAAGATGGGAGCGAGCCTTTTCTGAAAAACAGCAGAAGCTAGTTCAAACTACAAAAAATTTGGTCGATGAAGTTTGGATAAATCGACCACAGGCAGAGATCAATGCTGTTATTGTACAGCCACTGAAATTCGCAGGTCGCTCTGTTGCAGATAAGTTAAAAGATTTGAGAAAAAGGCTTCTGCAGGAGCAAGCCCGCGGTATAATTTTCACAGCACTTGATGAGGTTGCGTGGTTGTATAATATTCGTGGAACTGATGTGGCCTACTGTCCTGTTGTTCATGCATTTGCTATTGTGACAGCCAATTCTGCTTTCATTTATGTGGACAAGCAAAAGGTTCAAGCTCATTTAGTGGAGAATGAAATTGAAATTCGAGACTATACAGCTGTAAGCTCTGACGTGACATTGCTTGCAACTGACGATCTTGATACTGTATCTACTGTCAAGAGAGTAAATGGCGGACATCAAGCAGAAGAAAACAGCAACAACCTGATATGGGCTGATCCAGGTTCATGCTGTTACGCGCTGTACGCAAAGTTGAACCCTGATATAGTTCTGTTGCAGCAATCACCTTTGGCCCTTGCTAAAGCTTTAAAGAACTCAGTGGAGTTGGATGGGTTAAAAAAGGCGCATATTCGTGATGGTGCAGCCGTCGTGCAATATCTTGTCTGGCTGGATAAGAAGATGCAGGATGTTTATGGAGCTTCTGGATACTTTTTGGAGAAGGAATCTGCCAAAAAGGAGAAACAGCTGCAATCCTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAAGTTTCCGAGCATCCAAAGAGAATTTCAAAGGATTGAGTTTCCCCACCATTTCGTCTGTTGGCTCAAATGCAGCTATCATTCATTATTCACCAAAGGCTGAAGCATGTGCTGAACTTGATCCAGACAAAATTTATCTCTTTGATTCTGGAGCTCAGTATCTAGATGGAACAACAGATATTACACGAACAGTTCATTTTGGGAAACCTTCAACTCATGAAAAAGCATGTTATACAGCAGTCCTAAAGGGTCACATTGCTCTTGGAAATGCTAGATTTCCTAATGGGACTAATGGGCATGCTCTTGACATTCTTGCCCGAATTCCTTTGTGGAAAGATGGTCTTGATTATCGACACGGTACTGGTCATGGAATTGGGTCCTATCTCAATGTTCACGAAGGACCTCACCTGATCAGTTTCAGGCCACAGGCTCGAAATGTACCGTTGCAATCTTCCATGACTGTTACAGATGAACCTGGTTACTACGAGGATGGAGAGTTTGGAATAAGATTGGAGAATGTGCTTATTGTCAAAGAGGCTGATACAAAATTCAATTTTGGTGATAAAGGTTACTTATCTTTTGAGCACATTACCTGGGCACCATATCAAACGAAGTTGATTGACCTGAAACTTTTAAGTCCTGACGAGATTAATTGGGTGAACTCCTATCACTCTACATGTAGAGATATTCTAGCGCCATATTTGGATGAAGTTGAAAATGCTTGGCTGAAGAAAGCTACTGAACCAATAGGTGCATGA 1911 0.428 MEDTLSGLRSLMATHSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTKNEALLWTDGRYFLQASQELSAQWKLMRIGEDPAVDIWIADNLPKEAFIGVDPWCISIDTAQRWERAFSEKQQKLVQTTKNLVDEVWINRPQAEINAVIVQPLKFAGRSVADKLKDLRKRLLQEQARGIIFTALDEVAWLYNIRGTDVAYCPVVHAFAIVTANSAFIYVDKQKVQAHLVENEIEIRDYTAVSSDVTLLATDDLDTVSTVKRVNGGHQAEENSNNLIWADPGSCCYALYAKLNPDIVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKKMQDVYGASGYFLEKESAKKEKQLQSLKLTEVTVSDQLESFRASKENFKGLSFPTISSVGSNAAIIHYSPKAEACAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEKACYTAVLKGHIALGNARFPNGTNGHALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPQARNVPLQSSMTVTDEPGYYEDGEFGIRLENVLIVKEADTKFNFGDKGYLSFEHITWAPYQTKLIDLKLLSPDEINWVNSYHSTCRDILAPYLDEVENAWLKKATEPIGA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02913 636 FunFam Xaa-Pro aminopeptidase P 316 634 - -
Vimu7g02913 636 Pfam Creatinase/Prolidase N-terminal domain 147 322 - -
Vimu7g02913 636 Pfam C-terminal region of peptidase_M24 575 634 IPR032416 -
Vimu7g02913 636 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 133 IPR029149 -
Vimu7g02913 636 SUPERFAMILY Creatinase/aminopeptidase 319 600 IPR036005 -
Vimu7g02913 636 Gene3D - 1 145 IPR029149 -
Vimu7g02913 636 Pfam Creatinase/Prolidase N-terminal domain 6 142 IPR000587 -
Vimu7g02913 636 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 503 515 IPR001131 -
Vimu7g02913 636 PANTHER XAA-PRO AMINOPEPTIDASE 1 3 634 - -
Vimu7g02913 636 Pfam Metallopeptidase family M24 327 563 IPR000994 -
Vimu7g02913 636 CDD APP 325 571 IPR033740 GO:0070006
Vimu7g02913 636 Gene3D Creatinase/methionine aminopeptidase superfamily 316 634 IPR036005 -
Vimu7g02913 636 FunFam Xaa-pro aminopeptidase P 1 145 - -
Vimu7g02913 636 Gene3D - 146 314 IPR029149 -
Vimu7g02913 636 FunFam Probable Xaa-Pro aminopeptidase P 146 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02913 Vimu-Chr7 24538851 24545990 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02913 K01262 - gmx:100803268 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02913 7 24538851 24545990 Vimu7g02913 7 24538851 24545990 ECH