Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02905 TACTCCCTCCTCGCCGGCGGTAAGAGGGTCCGCCCCATCCTCTGCATCGCTGCCTGTGAGCTCGTCGGTGGCGATCATGCCACTGCCATCCCAGCCGCCTGTGCCCTCGAGATGATCCACACCATGTCCCTCATCCATGACGATCTGCCCTGCATGGACAACGATGACCTCCGCCGCGGCAAGCCCACCAACCACAAGGTATTTGGCGAGGATGTGGCGGTTCTTGCCGGTGATGCGCTGCTTGCGTTTGCTTTCGAACACTTGGCAGCAGCGACAGAGGGTGTGTCCCCAGCGCGCGTGGTTCGTGCAATTGGGGAGTTGGCAAAATCGATCGGAGGAGATGGCCTTGTGGCGGGACAGGTGGTGGATTTGGATTCGGAAGGAGCCTCAAATGTGGGGCTGGAGAGGTTGGAATTCATTCATGTGCACAAAACGGCGGCGTTGCTGGAAGCTGCGGTTGTGTTAGGCGCAATAGTGGGCGGTGGGTCGGACGAGGAGATTGAGAAATTAAGGAAGTTCGCCAGGTGCATTGGATTGTTGTTTCAGGTGGTGGATGACATTCTGGATGTAACTAAGTCGTCCGAGGAATTGGGGAAGACGGCGGGGAAGGACTTGGTGGCTGATAAGGTCACGTACCCTAAACTTTTAGGGATACAGAAGTCCAAAGAGTTTGCTGAGAAACTGTTGCTGGAAGCCAAGGAACAATTGTTTGGATTTGATCCCCCAAAGGCAGCTCCTTTATTTGCATTAACCAATTACATTGCTTACAGGCAAAGTTAA 780 0.5436 YSLLAGGKRVRPILCIAACELVGGDHATAIPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHLAAATEGVSPARVVRAIGELAKSIGGDGLVAGQVVDLDSEGASNVGLERLEFIHVHKTAALLEAAVVLGAIVGGGSDEEIEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIQKSKEFAEKLLLEAKEQLFGFDPPKAAPLFALTNYIAYRQS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02905 259 Gene3D Farnesyl Diphosphate Synthase 1 259 IPR008949 -
Vimu7g02905 259 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 258 - -
Vimu7g02905 259 FunFam Geranylgeranyl diphosphate synthase 1 259 - -
Vimu7g02905 259 Pfam Polyprenyl synthetase 2 229 IPR000092 GO:0008299
Vimu7g02905 259 SFLD Isoprenoid Synthase Type I 1 257 - -
Vimu7g02905 259 SUPERFAMILY Terpenoid synthases 1 238 IPR008949 -
Vimu7g02905 259 SFLD Polyprenyl Transferase Like 1 257 - -
Vimu7g02905 259 ProSitePatterns Polyprenyl synthases signature 1. 44 60 IPR033749 -
Vimu7g02905 259 CDD Trans_IPPS_HT 1 257 IPR000092 GO:0008299
Vimu7g02905 259 ProSitePatterns Polyprenyl synthases signature 2. 177 189 IPR033749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02905 Vimu-Chr7 24474875 24475804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02905 K13789 - gmx:100778289 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02905 7 24474875 24475804 Vimu7g02905 7 24474875 24475804 ECH
Vimu7g02905 7 24474875 24475804 Vimu7g02905 7 24474875 24475804 PCT