Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02896 ATGGCTTCTACTCATGAACTCAATTCCTCTGCATTAATAGCTTTCTGTCTCATCCTTATCATTTCCACTAATGCCGCTGCCATCACTGCACATCAAAAACAACACTTCAAACAAGCACCCAAATTCTACAACTCCCCCACCTGTGCCACCACTGCCCTCCAATACACCCACACCTGTTCCCACCAGGCAGTTCACGTCGCCATGACACTGGATATCACCTACCTCCGGGGCTCCATGGCGGCCATCCTCTCCGTCCTCCAGCACTCCTCCTGTCCAGAAAACGTCATCTTCCACTTCGTCACCGCCGTTTCCAGGGCCTCCGCCTCCGCCCTCCTTAACCGCACCCTCTCCAATTCCTTCCCTTATCTCAATTTCCAAATCTACCCCTTCAACGACCTCCAAGTTGCCGGCCTCATCTCCACCTCAATCCGCTCCGCTCTCGATTGCCCCCTCAACTACGCCCGCAACTACCTCGCCAACCTCCTC 486 0.5432 MASTHELNSSALIAFCLILIISTNAAAITAHQKQHFKQAPKFYNSPTCATTALQYTHTCSHQAVHVAMTLDITYLRGSMAAILSVLQHSSCPENVIFHFVTAVSRASASALLNRTLSNSFPYLNFQIYPFNDLQVAGLISTSIRSALDCPLNYARNYLANLL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02896 162 SUPERFAMILY Nucleotide-diphospho-sugar transferases 64 162 IPR029044 -
Vimu7g02896 162 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 64 162 IPR029044 -
Vimu7g02896 162 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 14 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02896 Vimu-Chr7 24431406 24432126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02896 34 162 Glycosyltransferase AT3G50760 61.240 3.10e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02896 K20893 - gmx:100783054 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02896 7 24431406 24432126 Vimu7g02896 7 24431406 24432126 ECH
Vimu7g02896 7 24431406 24432126 Vimu7g02896 7 24431406 24432126 PCT