Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02895 ATGCCTCCCTCGTACTGCGTGAAGGAGAGCAAACCCTGCGTCGGTTGGGTTCAGCGTTACTTGGATGATTGTCTCTGCGATCTTAAGGATGAAATCTCCTTTTCCTTGGGCTTCATCAGTCTCATATGCTGGGGAGTAGCAGAAATTCCTCAGATCATCACCAACTTTCGAGCTAAGTCTAGCCATGGTGTCTCCCTAGCCTTTCTCCTCACTTGGGTCGCTGGGTTCGTCAACTTTTCCCTCTTTCTTTTCTCTACTAATTTTAACCTAACGTTTTATTACTCCCACAATTACTCTAATTCCTTTGCTCGACCATTTTGA 321 0.4548 MPPSYCVKESKPCVGWVQRYLDDCLCDLKDEISFSLGFISLICWGVAEIPQIITNFRAKSSHGVSLAFLLTWVAGFVNFSLFLFSTNFNLTFYYSHNYSNSFARPF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02895 106 Gene3D - 28 100 - -
Vimu7g02895 106 Pfam PQ loop repeat 32 91 IPR006603 -
Vimu7g02895 106 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 3 89 - -
Vimu7g02895 106 SMART ctns 46 77 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02895 Vimu-Chr7 24422267 24422587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02895 K23678 - gmx:100815310 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02895 7 24422267 24422587 Vimu7g02895 7 24422267 24422587 ECH
Vimu7g02895 7 24422267 24422587 Vimu7g02895 7 24422267 24422587 PCT