Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02883 ATGGGGGATATCAGGATTACCCGGGTAGAGCAAAGTCAAACAAAGATTAAAAATGTTCCAATTGCTGTCACCCCTGAAGGATTTTGGTGTTGCCCTACTCCTGTTGGGTTCCAGAAAAGCCTCAAGCCTCAAAACCCTTTGAATAAACTCAAACCCTCCCCACCAGCTCCGAAGACAAGTTCCCAGAAAAAGGAAGTCTCGGTGAGTGAGAGAAAAGCAGGGCCTGCCCCGTCAAGGTTGGTGGTTTCTGATGCTCAACAATGTAATGATGATCCAGAAAGACCTCCACCTAGCCCTTCTGTGCCTGCACAGAGAGCACCTAGACCCAAACTTGAATCTATGCCAAAAAAAGTGGCTATTGAGTTTGGTGAACCTGGAACTTGTGACATTAAGCTTCTTCTCCTTGGAAAGCAGGGTTTTTGTGTGAAGTTAAGTGTTCACAAGGATGTTTTAAAAGAGAAGAGTAGTTTTTTTGCTGATAAACTTTCTGAACAATCTGGTTTGTCATGTCTCCAAGTTGATGACTGCGAGGATGTTGAAATATATGTTGAAACTGTTGGGCTTATGTACTGCAAAGAAATGAAGCAGCGGCTAATGAAGCAAAGCGTTTCTCGCATTCTTAGAATACTTAAGGTTGCAGAATTCCTAAACTTCAGCTCATGTATCCAATCATGTTTGGAGTACTTGGAAGCAGTCCCTTGGAATGGGGAGGAAGAAGAAGAAAAGGTGATTTCAACAGTTCTACGACTCCAAGGAGATGGAATCGGGGTCAATCCGGTGCTAAAACGAGTTTCTCCCGATACTTCCAATGCCCCAAAAGATACCCTCTCACACATCGTTGAACTTGTTCTGAAATCCAATGAGGAGAGAGGTCGCCGAGAGATGAAATCCATCGTTCTAAAGCTGCTTAGGGAGAACAATAGTCTTCCAAGTTCTGCAGGTTCAGTGGACATCTGTAATGACATGATTTATAAGTCATGCAGAAGCTGTTTGGATTCATTATTGTGCCTGTTCAACCAAGCTGCAGAGCCAGAGTTCAAAGACATGCCTAGCGATAACAAAGAACCTGTAGTAAAACATATAGCTCTCGAAGCTGATAACTTGTCATGGTTGCTGGAGATTTTAATCGATAAACAAGCTGCTGAAAATTTGACGGTGATGTGGGCAAACCATCAGGAATTGGCAGCCCTACATGGAAAGCTTCCCATTGCGTTTCGCTATCATGTAAGCTGCATTTCTGGAAGACTGTATGTGAGCATAGGAAGAGGGGAGGTTTTGCCATCGAAGAACACACGGCAGTTGTTGTTGCAGACATGGCTGCAGCCTCTAATCAACGACTACAACTGGTTGCAACACGGATGCAGGACATTTGACAGGAAACTTGTGGAGGAAGGAATTGGAAGAACAATTCTGACCTTGCCTTTGGAGGATCAACAGAGTATTTTGCTTTCTTGGGTTGGAAGCTTCTTGAAAACTGGTGATGGTTGTCCCAATCTTCAGAGAGCTTTTGAGGTGTGGTGGCGGAGGACTTTCATAAGACCCTATGTGGAAGCCATGCCAGATGCTTGA 1569 0.4423 MGDIRITRVEQSQTKIKNVPIAVTPEGFWCCPTPVGFQKSLKPQNPLNKLKPSPPAPKTSSQKKEVSVSERKAGPAPSRLVVSDAQQCNDDPERPPPSPSVPAQRAPRPKLESMPKKVAIEFGEPGTCDIKLLLLGKQGFCVKLSVHKDVLKEKSSFFADKLSEQSGLSCLQVDDCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVAEFLNFSSCIQSCLEYLEAVPWNGEEEEEKVISTVLRLQGDGIGVNPVLKRVSPDTSNAPKDTLSHIVELVLKSNEERGRREMKSIVLKLLRENNSLPSSAGSVDICNDMIYKSCRSCLDSLLCLFNQAAEPEFKDMPSDNKEPVVKHIALEADNLSWLLEILIDKQAAENLTVMWANHQELAALHGKLPIAFRYHVSCISGRLYVSIGRGEVLPSKNTRQLLLQTWLQPLINDYNWLQHGCRTFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDGCPNLQRAFEVWWRRTFIRPYVEAMPDA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02883 522 MobiDBLite consensus disorder prediction 41 112 - -
Vimu7g02883 522 SUPERFAMILY POZ domain 125 229 IPR011333 -
Vimu7g02883 522 Gene3D Potassium Channel Kv1.1; Chain A 122 249 IPR011333 -
Vimu7g02883 522 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 117 517 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02883 Vimu-Chr7 24306967 24309951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02883 - - gmx:100818853 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02883 7 24306967 24309951 Vimu7g02883 7 24306967 24309951 ECH
Vimu7g02883 7 24306967 24309951 Vimu7g02883 7 24306967 24309951 PCT