Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02878 ATGGGAAACTGCAACTCCTCCGATTCAATCCGGGTGGCCACGGCCAAGCTTATTCTGCAAGACGGAAAGTTGCAGGAGTTCTCATATCCCGTGAAGGTATCCTTCTTGTTGCAGAAGTATCCCGCCTGCTTCATATGCAACTCTGACGAAATGGACTTCGACGACGTCATTTCGGCCATCGACGAAGACCAGGTCCTGCAACCCGGTCAGCTCTATTTTGCCCTTCCCCTCAGTCGCTTGAAGCAGCGCTTGCAGCCTCACGAGATGGCCGCATTGGCTGTCAAGGCCAGCTCCGCGCTCATGAAAACAGCCGACAAATGCGGTTCTCGCCGCAAACAGATTTTGTTCTCTAACGAATATGATTCTAACCCTAAGCGTGTGTCTCTCACACTCGCTGCCGCTGCCGGAACTGTACATAGAAGGGGAAGGGCCGCCGCTCCTGCCGGTAAGGGGAGATTTGCGGCCTTGTTGAGTTCCATTCCGGAATAG 489 0.5399 MGNCNSSDSIRVATAKLILQDGKLQEFSYPVKVSFLLQKYPACFICNSDEMDFDDVISAIDEDQVLQPGQLYFALPLSRLKQRLQPHEMAALAVKASSALMKTADKCGSRRKQILFSNEYDSNPKRVSLTLAAAAGTVHRRGRAAAPAGKGRFAALLSSIPE 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02878 162 Pfam PADRE domain 1 162 IPR025322 -
Vimu7g02878 162 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02878 Vimu-Chr7 24241155 24242800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02878 - - gmx:100787837 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02878 7 24241155 24242800 Vimu7g02878 7 24241155 24242800 ECH
Vimu7g02878 7 24241155 24242800 Vimu7g02878 7 24241155 24242800 PCT