Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02679 ATGTTTCCCAAAGTTTATGCTGGCCAGGAAATGGCAATGGTTGAGAATGATAGTTGCATAATGAATGGTAACTGGAAGAAACGTGTGCATGTTTTTGGTGAGAGGGTGAGGAGAATTCCTACTAAAGCTTGGCAAACTACATGGAGGGTGGGGCGTGAAGATCCAAGAAGGTTGATCCATGCATTCAAAGTTGGTTTGTCCCTCACTCTGGTTTCTCTGTTGTACTTGTTGGAGCCATTTTACAAGAGCATTGGACAGAGTGCTATTTGGGCTGTCATGACTGTGGTGGTTGTGTTGGAATTCACAGCAGGCAAGGGCAACTTTGTGCAAAGGACTCAACAGAGGATTGGGAACACTGTTAGCAGGATTATTGGCATTTATTGTTGGGTATGTTGCAGATGCATCTGGCAGAGCCTCTCAAGCTATCATCATCGGAGCTGCAGTTTTTTTTATAGGTTTATTCCCTATATCAAGAAGAATTATGACTATGGTATAGTTATATTTCTCTTGACTTTCAACCTTATTGCTGTGTCAAGCTACCGGGTTGATAATGTGTTGAAGATTGCACATGAGCGTGTATACACCATTGCCATAGGCTGTGCTGTTTGCCTTCTCATGAGTCTACTGGTATTTCCAAATTGGTCAGGAGAAGACCTCCATAATTCCACTGTTTACAAGCTTGAAGGCCTTGCAAAATCTATAGAAGCTTGTGTGAATGAATACTTTTATGGAGAGCTAGAAGGATCTGGAGATATAAAATTGTCTGAGGATCCAATATACAAAGGTTATAAGGCTGTTTTGGATTCAAAATCCATTGATGAAACACTGGCATTGCATGCAAGTTGGGAGCCAAGGCACTCTAGATACTGTCACAGATTTCCATGGCAGCAATATGTGAAAGTTGGAGCTGTTCTGCGTCAATTTGGTTATACTGTTGTGGCCCTTCACGGCTGTTTGAGAACAGAAATTCAGACACCACGATCTGTGAGAGCCATGTTCAAGGACCCTTGCATTCGGCTTGCAGCAGAGGTATCGAAAGTACTGATAGAACTTTCCAACAGCATAAGGAATCGTCGGCATTGCTCTCCAGAAATACTCTCCGATCATCTGCACGAAGCCCTGCAGGACCTGAACACTGCCATAAAATCTCAACCTCGGCTCTTCTTGGGCCCCAAACACAAGCACAACCAAGCAAGCAACATGTTCAAAATAGCTGCTGAACAAGTTGGGCATGGAAAGACCTCCCTTTCAAGTGTTAAAACCGATTCTTCAGCATTGCTGGAGTGGAAAAACAAAAGGGTTACCACTGAACAGACAAAGGAATCAGAACGAAAGTCTCTGAGGCCCCAACTGAGTAAAATTGCAATCACTAGCCTTGAGTTCTCTGAGGCTCTTCCTTTTGCTGCCTTCGCATCTTTGCTTGTGGAAACAGTTGCAAAACTGGATCTTGTCATAGAGGAAGTTGAAGAACTGGGGAGACTCGCATGCTTCAAAGAGTTCATACCTGGTGATGAATTTGTTGTCACTTGTGACGAGCCTCGAATTGACGTGTTTCAGAACCATTTACCATCTCATGGAGTGGACTAA 1587 0.4354 MFPKVYAGQEMAMVENDSCIMNGNWKKRVHVFGERVRRIPTKAWQTTWRVGREDPRRLIHAFKVGLSLTLVSLLYLLEPFYKSIGQSAIWAVMTVVVVLEFTAGKGNFVQRTQQRIGNTVSRIIGIYCWVCCRCIWQSLSSYHHRSCSFFYRFIPYIKKNYDYGIVIFLLTFNLIAVSSYRVDNVLKIAHERVYTIAIGCAVCLLMSLLVFPNWSGEDLHNSTVYKLEGLAKSIEACVNEYFYGELEGSGDIKLSEDPIYKGYKAVLDSKSIDETLALHASWEPRHSRYCHRFPWQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLAAEVSKVLIELSNSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGPKHKHNQASNMFKIAAEQVGHGKTSLSSVKTDSSALLEWKNKRVTTEQTKESERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLACFKEFIPGDEFVVTCDEPRIDVFQNHLPSHGVD 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02679 528 Pfam Aluminium activated malate transporter 48 492 IPR020966 GO:0015743
Vimu7g02679 528 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 41 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02679 Vimu-Chr7 22543847 22546696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02679 34 500 Miscellaneous Gene Families AT4G17970 59.339 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02679 K25841 - gmx:100788625 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02679 7 22543847 22546696 Vimu7g02679 7 22543847 22546696 ECH