Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02678 ATGAATGGTGTAGGATTCTCTGCGGCGGCATGGAGTTCTTTGATCCCTTTTTCATCATCTTCTTCTTCTTCTTGGGTTTCTCAGAAGAAATTGGTGAGACCCAAAGCCCTGAACAGGGCCTTCACCTCAGACCCCTACGTTCTGGAACTGGCTGAAACCCTTGAAGAGAGCATCCCTTCCACACCCTCCACCCCTCTTCCTCTCCACAACCTCCGAAACGCTTCCTCCCAATCCCTCCTCTCTACTCCATGGCCTTCCCGCCGGGACGAGCCCTTCCGCTTCACCGACCTCTCCTTCATCCGTCAATCCCGCATTCTCCCCCTCTCCCATCCCTCTCCCGTCAAAATCCTCACTTCCCACCTCCCTCCCACCGTCTACGTCGGCCCCCTCTCCGCCCTCTCCTCCTCCTCCCTCCTCCACACGGTCTCCCAATACCTCCCCCACACCTTCCCCGACGCCGACCTCTTCTGGTCCATCAACGGAATCGCCGCTCCCGATTTAACCCTCGTCTACGTCCCGGAGAACTGCCACCTACAAGACCCCATCCACTTCCACTACACTCCGCCGCAGCCCCCCACCACCCACCCTTCCGACACCATGTACCTTTCCAATCCCAGGGTCCTCGTCGTGCTCGAGAAAGGCGCACGTGCCCATATAACTGAAGACTTCTCCTCCGAGCAGGGGAACGACAACGGCCGTTATTGGAGTAACGCTGCTTTTGAGGCGGTCATCGGAGAAGGTGCCAAGCTTTCTCATTCTTACGTCCAGACACAGTCTTTCCATGCCGCTCACACCAAATGGACCTCCGTTCGCCAGGATTCGTTTAGTGCTTATGAACTCACAGAGGTAAGCGCGGGAGGAAAACTGGGGAGGCACAATCTTCGTATTCAGCAATTGGGTCCTGATACTGTCACCGAGTTATCCTCTCTGCACTTGTCTGTTGGTGAGCAAACGCAGGACCTTCATAGTACTCTTGTATTGGACCATCCACGGGGCTATTCTCGACAACTTCACAAGTGCATTGTTGCTCATTCACAGGGACAGGCAGTTTTTGACGGAAACATTAAGGTTAACAGGTATGTATATGCACTTGTGCTGCAATATGTGAATGAAATGCACTCCGTACAATCTATTGAGAGACTAAGGTATGCTCAGCAGACTGATGCAGGTCAGTTAACAAGAAGTCTTCTGCTTGAACCTCGTGCGACTGTGAATGTTAAACCAAATCTCCAAATTGTGGCGGATGATGTCAAGTGTTCCCATGGGGCTGCAATAAGTGATCTGGAAGAAAGTCAGCTCCTCTATTTCCAGGCACGTGGCATCGACCAAAACACTGCTAGAAGAGTTCTAATTTTTGCCTTTGGAGGAGAGGTGATAGATAAGTTTCCATCTTCTTCCATTAGAGACAGAGTACGAAGTCATATTAAAAATTTGTTGGATCCATCCTCTAATTGA 1455 0.5155 MNGVGFSAAAWSSLIPFSSSSSSSWVSQKKLVRPKALNRAFTSDPYVLELAETLEESIPSTPSTPLPLHNLRNASSQSLLSTPWPSRRDEPFRFTDLSFIRQSRILPLSHPSPVKILTSHLPPTVYVGPLSALSSSSLLHTVSQYLPHTFPDADLFWSINGIAAPDLTLVYVPENCHLQDPIHFHYTPPQPPTTHPSDTMYLSNPRVLVVLEKGARAHITEDFSSEQGNDNGRYWSNAAFEAVIGEGAKLSHSYVQTQSFHAAHTKWTSVRQDSFSAYELTEVSAGGKLGRHNLRIQQLGPDTVTELSSLHLSVGEQTQDLHSTLVLDHPRGYSRQLHKCIVAHSQGQAVFDGNIKVNRYVYALVLQYVNEMHSVQSIERLRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIVADDVKCSHGAAISDLEESQLLYFQARGIDQNTARRVLIFAFGGEVIDKFPSSSIRDRVRSHIKNLLDPSSN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02678 484 PANTHER PROTEIN ABCI7, CHLOROPLASTIC 34 360 IPR011542 GO:0016226
Vimu7g02678 484 Pfam SUF system FeS cluster assembly, SufBD 382 454 IPR000825 GO:0016226
Vimu7g02678 484 Pfam SUF system FeS cluster assembly, SufBD 203 359 IPR000825 GO:0016226
Vimu7g02678 484 SUPERFAMILY Stabilizer of iron transporter SufD 58 480 IPR037284 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02678 Vimu-Chr7 22540753 22542569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02678 K09015 - gmx:100791104 627.476