Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02669 ATGTCAGGGTACATTAGCGACAATCTTAATTGCAAAAGCAAAAGAATCATGGAAGGTAGATCACAAATTACAGAAGACTGTAGATACCATTCACATGACACCACAGCCTTGCAAGAACTTTTGATGGTGAAGCTCTCAAAAGATAAGGCAAATTGGTGTCTCAAATCCTTCAGCAATTTCAATGACTCAGCTTTTGGGGGTCATTCAGGGTATGGATTAACTTACAGAAAAATTAAAGAACAATTTTATTGGAAAGGCATGCAAAAGGAAGTGAAAAGTCCATTTGAAGCTCTCTATGGGTACCCGCCTGCTCCCCCATCTACGATAATGAATAGTGATCAGATGGTGGAAGCTGGAAGAAATCTCTCAGCTGCTACAAGTAAATTTGATCAAGGCACAAACCAGGATGAAGTGCAAGACAGAATTGGGACTGTTGCTTACAAATTGGACTTACCACATGGAACGAAGATTCATAACGTCTTCCATGTATCATTATTGACGAAATACCATGGTGATAAGCCCGTTTCTGTGCAACTACCTTTATTGAATGATGAAGGAGAATTTGTGCCTCAACCTCTGCCCGTTTTGGCTAAGAGAATGAAGAAGAAACATAACAAACCCGTGACTGAGGTGTTAATACAGTGGAAGGACAATAATCCTGAGGATGCTCTCTTCAATTTCCAGACTTTGATCGAAATGGCTAGTTATAGGCCTTGTGGTCAAGTCCTAGTTATATACGAAGGAGTTGACCTTGGTGTCGAGCATGATGGCTACGACCTTATCCTGAAACTGAGCATTGTGCGAGGCGTGGTCCCCGTGCGACATGTTCAAACGCGCCACGTTCATTCCGGCTTCAGCCAGGCTCCATATCATGTCACGCGAGCTCGTGGATGGACCTATCGTGCACACGATCTTAGTTTTCTTACGCGCCTCGGACTTCGGTCCTGCGTGTCCCACGCCATGATCACTCACCTGAACCGAAGAGTTTGCGTTGCCCTACGCAATGGATTGAAGAACACAGAGGTTAGAGATAGCGAAGTGAGATTAGTTTGCGGAAATTACAAGCGACTTACGACGGAGGGAGAGCCGTTGGAGGAGCTAATTTGGGTCGGTTGGGCGTGGGATGCCTTTGGTTCTGCGTTTGGAGGGAGAGAGTTCGGATTGGAAGAGCAAGGAAGTTGCAGAAGAAAGATGAATGCAAAAGATAAACAACTATCTCCTGTATTTTATTTGTTGCAGTTCCCACCAACCAGGTTCCATTGGCGCGTGCACGGTGGTTGCAGCAACACCACCTCATCACTCACTATGAAGCTGTCCTTGAAGTTCCAGGGTGATGAAAACCACCACCAACACAGCGCACAAATCATGACGGCGAAGGTACCCATGACTATACTGAACAAGCCGTTTCTTTCAGCCGTCACCGCCACCACCGCCACCAACTCCGTTTCCGAGTTTTCCTTTTCACTCTCTTCAAACTTCACATCAGGCCCATCCCTCAAAGTCTCTTACACGCCCACCGCCTCTCAACCCTTCTCCCTCTCTCTCAAGTCGGGCCTGGGCCTGTTGGGCTCACCGGCTCACTCCCCTCTCGTCTTCTCCGCTAACTTCTCCCTATCCCCAACCCCGACCCCTTTTTTCTCTCTGCAATTCAAACCCCAATTCGGCCACTTCTCTCTCCACAAAACCGTTTTCTCCGATACCCCACCACCCCCTTCTCCTCTCCCTCCCACACCTCAAATTGTGTCCAACGAATCTTCCTCGGGTTGGCAGAATCTGAAATTGGAACCGTGCGATAACAGAGACCAATCACACCCTAACATTTTGGAAAACTCTAAGAACGATGCGAAGCACAGTCTCTCTCCTGTCATTAGGGTTATGGCTCGGACGGTGGTGCCTGTTACGAAAGGTTTCTTCTTGAACTTCCGCTGGGGGGTGAATTTTCCTCGGAATTTCAGTTCGAAAATGCCGAGCTTAACCGTGAATAAGATTGGGTTAGAGAGGGTTGAGGATGGGAAAGAGAGTAATAATAATGATAGTCAGAAAAAAAGGGTCAGTTCTGAAATTGATTTGCAGCTGTTGAAGGAGATGTGTTTTTGGATGGGGAGAGATTTGGAGAATGTGGAGAGGGAGAATAGGGAGATGAAAAGTGTATTGGATGAGATGAAAATGGGAATTTCCACCGCCAGAAAAGAAGTGGTGCTGCAACCAAACAGAGTGAGTGAAACCTCTTCTGGGGAGTTGCAGCGTCGAAGAAGTTACAAGAACGGAAGACAAGAGGACGAGAAAAAAGTGCAGCCAAACAAATCGCAGAGTGCGGCCACTGACGTGGAATCTGAGTTGCAGAAAGCCATTAAGGCTGCTACCTCTTAG 2370 0.4688 MSGYISDNLNCKSKRIMEGRSQITEDCRYHSHDTTALQELLMVKLSKDKANWCLKSFSNFNDSAFGGHSGYGLTYRKIKEQFYWKGMQKEVKSPFEALYGYPPAPPSTIMNSDQMVEAGRNLSAATSKFDQGTNQDEVQDRIGTVAYKLDLPHGTKIHNVFHVSLLTKYHGDKPVSVQLPLLNDEGEFVPQPLPVLAKRMKKKHNKPVTEVLIQWKDNNPEDALFNFQTLIEMASYRPCGQVLVIYEGVDLGVEHDGYDLILKLSIVRGVVPVRHVQTRHVHSGFSQAPYHVTRARGWTYRAHDLSFLTRLGLRSCVSHAMITHLNRRVCVALRNGLKNTEVRDSEVRLVCGNYKRLTTEGEPLEELIWVGWAWDAFGSAFGGREFGLEEQGSCRRKMNAKDKQLSPVFYLLQFPPTRFHWRVHGGCSNTTSSLTMKLSLKFQGDENHHQHSAQIMTAKVPMTILNKPFLSAVTATTATNSVSEFSFSLSSNFTSGPSLKVSYTPTASQPFSLSLKSGLGLLGSPAHSPLVFSANFSLSPTPTPFFSLQFKPQFGHFSLHKTVFSDTPPPPSPLPPTPQIVSNESSSGWQNLKLEPCDNRDQSHPNILENSKNDAKHSLSPVIRVMARTVVPVTKGFFLNFRWGVNFPRNFSSKMPSLTVNKIGLERVEDGKESNNNDSQKKRVSSEIDLQLLKEMCFWMGRDLENVERENREMKSVLDEMKMGISTARKEVVLQPNRVSETSSGELQRRRSYKNGRQEDEKKVQPNKSQSAATDVESELQKAIKAATS 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02669 789 PANTHER OS08G0510800 PROTEIN 436 788 - -
Vimu7g02669 789 Pfam Integrase zinc binding domain 61 92 IPR041588 -
Vimu7g02669 789 MobiDBLite consensus disorder prediction 744 766 - -
Vimu7g02669 789 Coils Coil 704 724 - -
Vimu7g02669 789 MobiDBLite consensus disorder prediction 738 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02669 Vimu-Chr7 22463746 22468534 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02669 - - gsj:114376300 447.203