Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02655 ATGTCAAGAACAGTGGAAGTAACAGTTTTATCCGCCGAGAATCTCCAACTGAACAAAAAACCCGTAAGAGGAAACACATTTGTGACGGTTCATTCCGACGCCGGCACCGACGCTGGTGCTGTCACGAAAGTGGATTCAGAGGGTGGAAGCTACCCTTCGTGGAATGACAAGGTTGTGGTGAACGTGCCGTTGCATGCAAGGTTCATAACGGTGGAGGTGAAGTCCAAAACGACGTCGTCGTCGTCGTTGACGGGGTCTAACAGTGTCGGCGTTGCACGAATACCGGTTTCTGATTTCATTGGAGGGTACGTGCCAGAAAATCAGCTGCATTTCTTGAGCTACAGGTTGTGGGACGGTAACGTTAAGAGAAATGGGGTTATAAATATTTCGGTGAGGGTGAAAGTATCGGAACGTTCCTCTTGTAGTTCCAATTCTTTGCCATTTGCGGCGGTAACTGGGGTGCCGGTGGCCGGTAATGGCTCCACCGGAGTTGTCACAGGGATTCCAGCTCTTTGCCAGAGTTCTCTCACCAAACTTGCTCCTCTTGAAGCAGTGCTCTTTGAAATAGATGGAACTCTCTGTGAATCCTATCGTGCGCATGAATGTATCATAAGTAGAATGCTTCGAGAGGTCATTGGTTTCAATGGTGGTGAACCCGTAACTCCAGGATTCATTTATGACATTATTGTCGGCAAAAAGAAAGATGATATAGCCTTGTCTCTGTTTCCTGATGATCTGCCACGAGGTTTAAAGTTTGTGGATGATGAGGAAGCCTTGTTCCGGAAAGAGGCAGCAAGGTGGATTTGGCCTAAGGAAGGCTTTATAAGACTGAGCAGATGGATTGAAAGACGTGAGTTGAAGAGAGCTGCAGTTACCAGTGCTTCAAGAGCAAATGCAGAGTTCATGCTCTCCCATCTTGGCCTCTCAGATTTCTTTGATGCTGTTATTATTGATGATGAATGTGAACATGGCAAGCCTCATCCAAAACCCTACCTGAAAGCTCTTGAAGCTCTCAAGGCATCAAAGGATCACTCGTTTGTATTTGAGGCTACTTTTCCTGGAGTCAAAGCAGGAGTTGCAGCTGGGATGCCTGTCATTGGTTTGGATTATTACACACCATTAAATCTTTTGAAGGAAGCAAAAGCTACATTTGTCATTAGTAATTATAAGGATCACAAATTGTGGGATGCTTTGTATGAACTTGAAAAGGTTAGTAGGGCTCTTTCAGTTTGA 1233 0.455 MSRTVEVTVLSAENLQLNKKPVRGNTFVTVHSDAGTDAGAVTKVDSEGGSYPSWNDKVVVNVPLHARFITVEVKSKTTSSSSLTGSNSVGVARIPVSDFIGGYVPENQLHFLSYRLWDGNVKRNGVINISVRVKVSERSSCSSNSLPFAAVTGVPVAGNGSTGVVTGIPALCQSSLTKLAPLEAVLFEIDGTLCESYRAHECIISRMLREVIGFNGGEPVTPGFIYDIIVGKKKDDIALSLFPDDLPRGLKFVDDEEALFRKEAARWIWPKEGFIRLSRWIERRELKRAAVTSASRANAEFMLSHLGLSDFFDAVIIDDECEHGKPHPKPYLKALEALKASKDHSFVFEATFPGVKAGVAAGMPVIGLDYYTPLNLLKEAKATFVISNYKDHKLWDALYELEKVSRALSV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02655 410 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Vimu7g02655 410 Pfam C2 domain 4 104 IPR000008 -
Vimu7g02655 410 Gene3D Putative phosphatase; domain 2 197 266 IPR023198 -
Vimu7g02655 410 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 132 IPR035892 -
Vimu7g02655 410 NCBIfam HAD-IA family hydrolase 287 367 IPR006439 -
Vimu7g02655 410 Gene3D C2 domain 3 134 IPR035892 -
Vimu7g02655 410 SMART C2_3c 4 108 IPR000008 -
Vimu7g02655 410 Gene3D - 183 391 IPR023214 -
Vimu7g02655 410 SUPERFAMILY HAD-like 177 401 IPR036412 -
Vimu7g02655 410 Pfam Haloacid dehalogenase-like hydrolase 185 367 IPR041492 -
Vimu7g02655 410 CDD HAD_BPGM-like 256 369 - -
Vimu7g02655 410 CDD C2_SRC2_like 4 129 IPR044750 GO:0006952
Vimu7g02655 410 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 183 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02655 Vimu-Chr7 22394339 22397691 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02655 - - var:108334764 330.487