Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02627 ATGGTTCAATTTCACGAACACATAATCACAGAGCTTCTAGAAGATTCCAATGGCGGTCTCGTGGTTCTCTCGTCCGGCCTGTCTCTCTCTAAACTCGTCTCGTCTCTCCTTATTCTACACTCCTCATCCGAGGGAACGCTCCTTCTTCTTTCTCCTTCCTCCACTTCACTCAAATCCAAAATCACCTTCCACCTCAAAACCCTAAACCCACAATTCAACCAAATCCCCGCCGAAATCACCGCCGAACTCCCCGCACACCACCGCCACGCGCTCTACTCCTCCGGCAATGCATTCTTCATCACGCCGCGCATCCTAATCGTCGACCTATTGACCAACAAGTTACCGACGTCCAAAATCGCCGGGATCCTCCTCCTTAACGCGCACTCGCTCTCCGAGACCTCCACCGAAGCGTTCATTGTTCGGATTTTCCGTTCGCTTAACCGCAGCGCGTATGTGCGCGCGTTCTCCGACAAGCCGCACGCGATGGTGTCGGGGTTCGCGAAGGCAGAGCGGACGATGAAGTGTCTGCACGTGCGGAAGCTTCACCTGTGGCCGCGGTTTCAGGTTTACGTGTCGCAGGAGTTGGAGAGGGACCCGCCGGAGGTGGTGGACATAAGGGTGCCGATGAGCAAGTACATGGTGGGGATTCAGAAGGCCATTATTGAGGTCATGGATGCTTGTTTGAAAGAGATGAGGAAGACGAACAAGGTCGACGTGGAGGATTTGACGGTGGAAAATGGGTTGTTTAAGTCTTTTGATGAGATTGTGAGGCGACAGTTGGATCCAATTTGGCACACTTTAGGGAAGAAGACCAAGCAGCTGGTCTCAGACCTTAAGACATTGAGGAAACTGTTGGATTATCTAGTCAGGTATGATGCAGTAACTTACTTGAAATATCTGGATACATTGAGAGTGTCAGAGAGTTTTCGGTCTGTTTGGATATTTGCAGAGGCAAGCTATAAGATATTTGATTATGCAAAGAAGCGTGTTTTTCATCTTGTGAGATCAGATGGCTTGAAATTTAATGAGTTGAGTAAGGGTGTCAAAAACAAAAAGAGAAAAAGTAAGGGTGATGGCAAAGACATTGAAGAAGCAGTTGATGGTACTTCACACTCTACTTTGAATTCCGGCTTAGTTTTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGAGGTTCTTGAGGAAGTAGAAGAGGAAAGACAAAAGGCTGGTATGTTGGGGGAAGAAATATTCACTGAAGGTGAAGACACCAATAATGGCATTGTACTAGTGGCATGTAAAGATGAAATGTCATGCTTGCAACTTGAAGAATGCATCACCGGCAGTCCAGAAAAGGTCATGCGTGAAGAATGGAAGAAGTACTTACTAAACAAAGTACAGCTGCGAGATATAGTGAACAAGAAAAAGAAGCCTAAGGATCCCAAACCCAAAGGTTTTGGGATTCTTGATGGAGTCACTCCCATAACACCTGCTCAGAATGCAGAAACCACCAGCATTAGTAAGCAGGAACATGATGCGCTTTTGGCAGCTGCCTCAAAACTAAGAAATGTTTCTGAAAATGACAATGCTAAGGATGCTCCACAGCCTGATATTGGTGGACAGGGAAGTGGTAAAAGAAGGAGAAAAGTGGGGATTAGAAAGGTCCCGGTTGTTCTTGATGGCGTGGGAGTTCAGAACAATGATAAAGAGGGATCAGTGAGTGATAAAATTGGGATGTCTGATTCAAAAAATGAAGTCAACGAAGATGAGACTAATACTGTCAGTGCAGGTAGATTTTCTTCTGAAGGGACATCTGTGGAAAACATAGTTCTTCGGAAGCATTCTAATCCTAATGTTGCAGCAAGAACTGGGAAGCCACTACCACCAGTGCACTTTTATGCCCTAGAAAGTGATCAGCCTATACTGGATATATTAAAGCCCTCAATAGTAATTGTTTACCATCCAGATATGGCCTTTGTCAGGGAAATCGAAGTCTACAAAGCTGAGAATTCCTCAAAAAGGTTGAAAGTGTATTTTCTTTTCTATGAAGCTTCAACTGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATTAGGCAAAAATCTATGATGATGATTCCAGTTGACCAGAGTGGCCACTCTTTAGGATTGAATTCTACTTTAGAATCAGATTTAACTACTCCTCAAAACTCAGTAACCAGAAAAGCAGGTGGGAGAAAGGAGGCTGATAAAGAAATGCAGGTTATTGTGGACATGCGGGAGTTCATGAGCAGCCTTCCAAATGTTCTTCACCAGAAGGGAATGCGCATCATCCCAGTGACCCTGGAAGTTGGTGACTATATCTTATCACCGTTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGCTTCACATCAGGTCGTCTATACCACCAGGTCGAGACAATGGTACGGTATTACAGAATACCTGTACTGTTGATTGAGTTTTCACAGGATAAGAGCTTTTCATTCCAGTCTGCTAGTGATATTGGTGATGATGTGACACCAAATAGCATTATATCAAAGTTATCTCTGCTTGCTTTACACTTCCCCAGGCTACGGATAATCTGGTCTCGAAGTTTGCATGCTACTGCTGAAATATTTGCTTCACTTAAGGCAAATCAAGACGAGCCAGATGAAACAAAAGCAATCAGAGTGGGTGTTCCCTCAGAAGAAGGAATTGTGGAAAATGATGTGAGGGCTGAAAATTACAATACATCGGCTGTGGAGTTTCTAAGACGACTTCCAGGTGTTACAGACTCAAACTACAGGGCCATAATGGACGGGTGTAAGAGCTTGGCAGAACTTGCACTTCTTCCTGTGGAGAGGCTAGCGGAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTTAGAGACTTTCTAGATGCTAAATACCCAACTTTGTTGTGA 2952 0.4451 MVQFHEHIITELLEDSNGGLVVLSSGLSLSKLVSSLLILHSSSEGTLLLLSPSSTSLKSKITFHLKTLNPQFNQIPAEITAELPAHHRHALYSSGNAFFITPRILIVDLLTNKLPTSKIAGILLLNAHSLSETSTEAFIVRIFRSLNRSAYVRAFSDKPHAMVSGFAKAERTMKCLHVRKLHLWPRFQVYVSQELERDPPEVVDIRVPMSKYMVGIQKAIIEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRSDGLKFNELSKGVKNKKRKSKGDGKDIEEAVDGTSHSTLNSGLVLEEVLEEAPKWKVLREVLEEVEEERQKAGMLGEEIFTEGEDTNNGIVLVACKDEMSCLQLEECITGSPEKVMREEWKKYLLNKVQLRDIVNKKKKPKDPKPKGFGILDGVTPITPAQNAETTSISKQEHDALLAAASKLRNVSENDNAKDAPQPDIGGQGSGKRRRKVGIRKVPVVLDGVGVQNNDKEGSVSDKIGMSDSKNEVNEDETNTVSAGRFSSEGTSVENIVLRKHSNPNVAARTGKPLPPVHFYALESDQPILDILKPSIVIVYHPDMAFVREIEVYKAENSSKRLKVYFLFYEASTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHSLGLNSTLESDLTTPQNSVTRKAGGRKEADKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAIRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVERLAELMGGHKAARTLRDFLDAKYPTLL 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02627 983 MobiDBLite consensus disorder prediction 522 547 - -
Vimu7g02627 983 Pfam ERCC4 domain 755 884 IPR006166 GO:0003677|GO:0004518
Vimu7g02627 983 MobiDBLite consensus disorder prediction 471 490 - -
Vimu7g02627 983 Gene3D - 752 899 - -
Vimu7g02627 983 SMART ERCC4_2 752 832 IPR006166 GO:0003677|GO:0004518
Vimu7g02627 983 Gene3D - 910 981 - -
Vimu7g02627 983 SUPERFAMILY Restriction endonuclease-like 749 887 IPR011335 -
Vimu7g02627 983 SUPERFAMILY RuvA domain 2-like 914 978 IPR010994 -
Vimu7g02627 983 FunFam DNA repair endonuclease XPF 752 896 - -
Vimu7g02627 983 MobiDBLite consensus disorder prediction 560 595 - -
Vimu7g02627 983 FunFam DNA repair endonuclease UVH1 910 982 - -
Vimu7g02627 983 Coils Coil 393 413 - -
Vimu7g02627 983 CDD XPF_nuclease_XPF_euk 752 886 IPR047520 -
Vimu7g02627 983 PANTHER DNA REPAIR ENDONUCLEASE XPF 1 982 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02627 K10848 - gmx:100812359 1661.35