Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02626 ATGGCTAACAGTGCAACCAATAAGAAGACAACTCTGTCAAGTTATTTCCATTCCCTTTCTCAAACTCCTCAAAGACTGAAAAAGAGAATGCTAGCCACTTGGACCCCTGATCAGGAACTGAACCAAGGGAGACAAAGGTCTGGAGCAGACATGAAAAGGAGTCTCGAGTGGTATGATCTTGTAGCTCTTGGACTTGGTGGAATGCTAGGTGTTGGTGTTTTTGTTACAACTGGTTCTGTTGCCCATCATCAATCTGGTCCTTCAGTTTTCATATCCTATATTATAGCTGGATTATCAGCTCTTCTCTCCTCCTTATGCTACACTGAATTTGCTGTTCAAGTCCCAGTAGCAGGAGGAGCTTTCAGCTATTTAAGATTAACCTTTGGAGAATTTGTGGGGTATTTTGCTGGGGCAAACATACTAATGGAGTATGTGCTTTCTAATGCTGCTGTATCAAGGAGTTTCACAGAGTATTTGAGCTTTGCATTTGGCCAAAATGATCCAAACGTGTGGAGAGTGAAACTGCATGGATTGCCAAAGGACTATAACATGTTGGATCTCCCAGCTGTTTCTCTTATTATTCTTCTCACTCTCTGCTTGTGCTATAGTACGAAGGAAAGTTCCATGTTGAACCTCATCATGACAATCTTCCATGTGATTTTCTTTGGATTCATCATTGTGAGTGGTTATTGCACTGGAAGTGTGAAAAACTTGGTCAGTCCAAAAGGGCTAGCCCCTTTTGGTGTGAGAGGTGTTGTAAACGGAGCAGCTAAAGTCTACTTCAGCTACATAGGCTATGACTCGGCTTCAACGTTGGCAGAGGAAATCAAAGATCCTTCTAAGAACCTACCAATTGGAATTGTTGGTTCAGTTCTCATAACCACAGTGCTCTATTGCCTTATGTCTCTATCTTTGTGCATGATGGCTCCTTATAACAAGATATCAGATAAATCATCATTTGCATTCGCTTTTGCAAAGATTGGAGGGATGTGGGAGAGCAACCTTGTTGGGGCAGGAGCAAGTTTGGGAATAGTGGCTTCTCTCTTGGTTGCGATGTTAGGCCAAGCTAGATACCTTTGTGTTATAGGAAGAGCACGTTTGGTGCCATCTTGGTTAGCTAAAGTTCATCCTTCTACAGCCACCCCATTGAATGCCACACTCTTTTTGGGAGTTTGCACCGCATGTATTGCTCTGTTCACTGATCTTGACATTATAATGGAATTGATCAACATCGGCACGCTGGTGGTGTTCTACTTGGTGGCCAATGCTCTGATATACCGTCGATACGTAATCACTAGTCACACCCCTCCTTTCTACACTCTCATTTTCCTCTTTCTCTTTTCACTCAGTGCTCTGGGCTTCTCCCTTTCGTGGAAATTCAATCAGCTATGGTGGGGTCTTCCACTCTTTGGTGGGGTCATGATCACTATCACAGCTTTTTACCACCACCAGGTGCCTCAGACCCATGCCCAACATGCTGCTACTGATTGGTGTGTGCCATTCATGCCCTGGCCACCTGTCCTCTCCATATTTCTCAATGTTTTCCTCATTACCACTTTAAAGGTTCTGTCTTTCCAAAGGTTTGCTATGTGGGCATGCTTCATTACCCTCTTCTATCTACTCTATGGTGTTCACTCCACTTACCAAGCAGAAGAGATTGAGATTGCTGCTAATCAAGTCAATTCAAGCTCAACCAACGCACAAACCAATAAGGTGGAAGTTCAAGTGCTGTAG 1734 0.436 MANSATNKKTTLSSYFHSLSQTPQRLKKRMLATWTPDQELNQGRQRSGADMKRSLEWYDLVALGLGGMLGVGVFVTTGSVAHHQSGPSVFISYIIAGLSALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFVGYFAGANILMEYVLSNAAVSRSFTEYLSFAFGQNDPNVWRVKLHGLPKDYNMLDLPAVSLIILLTLCLCYSTKESSMLNLIMTIFHVIFFGFIIVSGYCTGSVKNLVSPKGLAPFGVRGVVNGAAKVYFSYIGYDSASTLAEEIKDPSKNLPIGIVGSVLITTVLYCLMSLSLCMMAPYNKISDKSSFAFAFAKIGGMWESNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTATPLNATLFLGVCTACIALFTDLDIIMELINIGTLVVFYLVANALIYRRYVITSHTPPFYTLIFLFLFSLSALGFSLSWKFNQLWWGLPLFGGVMITITAFYHHQVPQTHAQHAATDWCVPFMPWPPVLSIFLNVFLITTLKVLSFQRFAMWACFITLFYLLYGVHSTYQAEEIEIAANQVNSSSTNAQTNKVEVQVL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02626 577 Gene3D Amino acid/polyamine transporter I 50 496 - -
Vimu7g02626 577 Pfam Amino acid permease 55 454 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vimu7g02626 577 PIRSF AA_transporter 484 566 - -
Vimu7g02626 577 PIRSF AA_transporter 32 496 - -
Vimu7g02626 577 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 34 547 - -
Vimu7g02626 577 Pfam C-terminus of AA_permease 497 546 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02626 Vimu-Chr7 22164361 22167370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02626 142 551 Organic Solute Cotransporters AT3G10600 50.119 8.77e-140 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02626 - - gmx:100790787 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02626 7 22164361 22167370 Vimu7g02626 7 22164361 22167370 PCT