Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02618 ATGTGGAAACCTAAACATTTTCATATTCTCTGTCTCCTTACTGATTCGGAAATTGTACTGCAGCAGGCACTTTTTGCGCCTAAGCTCACTTTTCCTTCCTCTTCCCCTCGTAACGTTGCGTTAATTTCTAGGGTTTCTTCGACTCCAATTTCATGGCGTTGCACTCCTCTTACTGCTAAGTCTAGTTTCGTCGTGAGAGCTGATTCCGACCTCGAAGGCGGTGGTGAAGCCACCGAAGATGTTCCTTCCGATAATGTTGATGACGTTTCGGAAGGCGAAACAGAACAGCTTTCGGATTCTGAAGCTCCGAAATTGCCCCGAAAAGCCAGAGTCAAGCTTGGAGACGTTATGGGGATATTGAATCAGAGGGCAATTGAGGCATCGGAGAAGGAAAGACCCACGCCAGACATTAGGACTGGGGATATTGTCGAAATCAAATTGGAGGTTCCTGAGAACAAGCGTAGGCTGTCCATTTATAAGGGGATTGTCATCTCAAAACAAAATGCTGGTATTCACACAACTATTAGAATCCGAAGAATCATTGCGGGCACTGGGGTTGAGATAGTCTTCCCAATTTACTCACCGAACATAAAAGAAATCAAAGTGGTAAGCCATCGTAAGGTCAGGAGGGCAAGATTGTACTATCTGAGAGACAAGCTTCCGAGATTCTCCACTTTCAAATGA 684 0.4518 MWKPKHFHILCLLTDSEIVLQQALFAPKLTFPSSSPRNVALISRVSSTPISWRCTPLTAKSSFVVRADSDLEGGGEATEDVPSDNVDDVSEGETEQLSDSEAPKLPRKARVKLGDVMGILNQRAIEASEKERPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02618 227 SUPERFAMILY Translation proteins SH3-like domain 124 227 IPR008991 -
Vimu7g02618 227 MobiDBLite consensus disorder prediction 74 95 - -
Vimu7g02618 227 MobiDBLite consensus disorder prediction 72 103 - -
Vimu7g02618 227 NCBIfam 50S ribosomal protein L19 125 219 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vimu7g02618 227 Gene3D - 91 226 IPR038657 -
Vimu7g02618 227 FunFam 50S ribosomal protein L19, chloroplastic 114 226 - -
Vimu7g02618 227 PRINTS Ribosomal protein L19 signature 180 203 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vimu7g02618 227 PRINTS Ribosomal protein L19 signature 121 150 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vimu7g02618 227 PANTHER RIBOSOMAL PROTEIN L19 46 227 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vimu7g02618 227 Pfam Ribosomal protein L19 124 220 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02618 Vimu-Chr7 22113378 22115172 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02618 K02884 - gmx:100500328 364.385