Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02537 ATGGGACGCTCCCTCTCCTCTCATTCCGAACTCCCTTCTTCCTATCTTCCTATACCCGACGGACCCTTTTCTCCGGCGGACCCTCCAAGGCACGTGACGAAAAAGGTGCTTCTCATCTCATCTGGGTTACTCATGCTGCTTCTGTCCTTGGTGACCTTCAATGCCTACTACCCGCATTCATCTGGAGATGGAGATCATGCTTCATTAACGCCCGATGAATTCGAATTCAGTGTGCCAAGCTCAATGTTGAAACCATTTTCACGTGGCGTCTCTTCAGGGGTGTCGGAGAAGTCTAGCTGGATGTTGAAGAGCATCAATGGAGAATCCTATCCTTGGAGCAATAGCATGCTGTCGTGGCAGCGAACGGCTTATCACTTCCAGCCTGAGAAGAATTGGATGAACGTGTTGAATGTAAAGGATACTAACTTTTTTCTTGTGTCTCTGTGGGTGTGGCTTCGGCTTGCTGTGCTTGGGGAACTTGGTTTGTCTGCTTCAGATCCTAATGTTGTTACAATTTGGGCAGGTCCTATGTACTACAAAGGGTGGTATCACTTCTTCTACCAATACAATCCGAAAGGTGCAGTTTGGGGTACCATAGTTTGGGGGCACGCTGTATCAAGGGACTTGATTCACTGGCTTCACCTACCACTGGCAATGGTGGCTGATCAATGGTATGACCAAAATGGTGTGTGGACAGGCTCTGCCACCATCTTACCCGATGGTCAAGTCATCATGCTATACACCGGTTCCACCAACGAGTCAGTGCAGGTCCAAAACCTTGCATACCCTGCAGATCCCTCTGATCCTCTCCTCGTTGATTGGATCAAATACCCTTCAAATCCAGTTCTGTTCCCTCCACCAGGCATCGATACCAAGGATTTTCGTGACCCCACCACAGCTTGGCTCACCTCAGAAGGCAAGTGGCGCCTCAGTATCGGTTCAAAGCTTAACAAAACCGGCATAGCCTTGGTTTATGATACCAGTGACTTTAAGACCTATGAGCGTGTGGAGGGACTGCTCCGTGCTGTGCCTGGCACTGGCATGTGGGAGTGTGTTGACTTCTTTCCAGTATCCAGTGAGGGTGAAAACGGCTTGGATGCTTCAATCAATGGGGAGAATGTGAAGCATGTGGTGAAGGTTAGCTTGGATGATGATAGACATGATTACTATGCAGTGGGGACTTACGATGAGAAGAATGCCAAGTTCACACCAGATGACTTGAAGAACGATGTTGGTATTGGACTCAGATATGACTACGGTATATTTTATGCATCCAAGACATTTTATGATCAGAGTAACGGAAGGAGAGTGTTGTGGAGTTGGATTGGAGAGTCTGATAGCGAATATGCTGACGTAGCCAAAGGTTGGGCATCAATTCAGGGTATTCCAAGAACAGTGACACTTGATAAGAAAAGTGGTAGCAGCTTACTTCAATGGCCTGTAGCAGAGGTGGAAAGTTTGAGATTGGGAAGCAATGAGTTTGAAAATTTGAAGGTGAAGCCAGGGTCAGTGGTGCCACTTGAAGTTGGAACAGCTGCACAGTTGGACATTGTAGCTGAGTTTGAGATAGATATGAAAGCCTTGGAGATGACTGGCCAATCCAATAAGGAGTACGAGTGTAGCACCAGTGGTGGAGCAGCAGAACGTGGTGCCTTAGGACCATTTGGTCTTCTAGTTTTGGCTGATGATGATCTTTCTGAATACACTCCCACATACTTTTACGTGGTTAAAGGAAACGATGGACAACTTAAAACTTCCTTTTGCTCTGATCAATTAAGGTCTTCTCTAGCAACTGATGTTGGTAAGAAAATCTTTGGGAGCTCTGTTACAGTACTAGAAGATGAAAAACTGTCAGTGAGGATATTGGTGGACCATTCTGTGGTGGAAAGTTTTGCTCAAGGTGGAAGAACATGCGTGACATCTCGAGTTTATCCAACGAAGGCAATCTATGGAGCTGCTAGATTGTTTTTATTCAATAATGCTACCCAAGTCACTGTGACTGCTTCAGTTAAAGTTTGGCAAATGAATTCTGCATTCATACGCCCCTTCAATCCACAACAAAGTAATTCTATTTAA 2076 0.46 MGRSLSSHSELPSSYLPIPDGPFSPADPPRHVTKKVLLISSGLLMLLLSLVTFNAYYPHSSGDGDHASLTPDEFEFSVPSSMLKPFSRGVSSGVSEKSSWMLKSINGESYPWSNSMLSWQRTAYHFQPEKNWMNVLNVKDTNFFLVSLWVWLRLAVLGELGLSASDPNVVTIWAGPMYYKGWYHFFYQYNPKGAVWGTIVWGHAVSRDLIHWLHLPLAMVADQWYDQNGVWTGSATILPDGQVIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPSNPVLFPPPGIDTKDFRDPTTAWLTSEGKWRLSIGSKLNKTGIALVYDTSDFKTYERVEGLLRAVPGTGMWECVDFFPVSSEGENGLDASINGENVKHVVKVSLDDDRHDYYAVGTYDEKNAKFTPDDLKNDVGIGLRYDYGIFYASKTFYDQSNGRRVLWSWIGESDSEYADVAKGWASIQGIPRTVTLDKKSGSSLLQWPVAEVESLRLGSNEFENLKVKPGSVVPLEVGTAAQLDIVAEFEIDMKALEMTGQSNKEYECSTSGGAAERGALGPFGLLVLADDDLSEYTPTYFYVVKGNDGQLKTSFCSDQLRSSLATDVGKKIFGSSVTVLEDEKLSVRILVDHSVVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATQVTVTASVKVWQMNSAFIRPFNPQQSNSI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02537 691 Pfam Glycosyl hydrolases family 32 C terminal 483 674 IPR013189 -
Vimu7g02537 691 MobiDBLite consensus disorder prediction 1 22 - -
Vimu7g02537 691 CDD GH32_Fruct1-like 166 468 - -
Vimu7g02537 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 480 679 IPR013320 -
Vimu7g02537 691 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 114 678 - -
Vimu7g02537 691 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 492 675 - -
Vimu7g02537 691 Gene3D Glycosyl hydrolase domain; family 43 165 491 IPR023296 -
Vimu7g02537 691 Gene3D - 492 675 - -
Vimu7g02537 691 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 166 492 - -
Vimu7g02537 691 SMART glyco_32 125 635 IPR001362 GO:0004553|GO:0005975
Vimu7g02537 691 Pfam Glycosyl hydrolases family 32 N-terminal domain 175 480 IPR013148 -
Vimu7g02537 691 Pfam Beta-fructofuranosidase, N-terminal domain 14 117 IPR021792 GO:0004564
Vimu7g02537 691 SUPERFAMILY Arabinanase/levansucrase/invertase 175 481 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02537 Vimu-Chr7 21569582 21573384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02537 11 691 Glycoside Hydrolase AT1G12240 58.849 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02537 K01193 - gmx:100798772 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02537 7 21569582 21573384 Vimu7g02537 7 21569582 21573384 ECH
Vimu7g02537 7 21569582 21573384 Vimu7g02537 7 21569582 21573384 PCT