Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02536 ATGATGGCGCTCAATTCCTTGTCACCAATTTCCGTTAATTCTCTTCTTGTATCTTCAAGCTCAACTTCCCTCACTTCGGACTTTCATTCAAAGCCCTTTGCCGTTTCCTGCCAATTCAACTCAAACAGAGATAGCTCTGAAGAAAGAAGAAAGAGTGTTGGTTGTAGTTCAGTGGCTGCCAATGCCGAATTCAGGAAATGGGGGAAAGTGGTTTCGGCCACTTTGGCAGCCGCCGTCATTGCCTTCGGCTCTGACACGTCTGCCCTTGCTGATCTCAACAAATTTGAGGCTGAAATGAGGGGTGAATTTGGGATAGGATCGGCTGCACAATTTGGCTCTGCAGATCTCAGGAAAGCAGTGCATGTGAATGAAAATTTCAGAAGAGCCAATTTCACAGCTGCTGATATGAGAGAATCTGATTTTAGCGGTTCAACTTTCAATGGTGCATACCTTGAGAAAGCTGTTGCATACAAGGCAAATTTTTCAGGGGCCGATTTAAGTGATACATTGATGGATCGCATGGTTTTAAACGAAGCCAATCTCACTAATGCCATTCTCCTTAGAACAGTCCTCACACGGAGTGACCTTGGGGGTGCCATCATCGAAGGTGCTGACTTTAGTGATGCTGTGTTGGACCTTACCCAAAAGCAGTGTCTTTATGTTCCTCCCATGATCAGGATCCATGACCCATCCTTGCTTGGAATATCTACCGTTGCTTTATGCAAGTATGCCAGTGGCACAAATCCTGTTACAGGAGTGAGCACAAGAGTAAGCTTAGGTTGTGGAAACAAACGACGAAATGCTTATGGCTCCCCATCATCTCCCCTTTTAAGTGCTCCACCACAGAAACTGCTTGACCGAGATGGTTTCTGTGATGAAGCAACAGGACTTTGCGATGCAAAGTAG 906 0.457 MMALNSLSPISVNSLLVSSSSTSLTSDFHSKPFAVSCQFNSNRDSSEERRKSVGCSSVAANAEFRKWGKVVSATLAAAVIAFGSDTSALADLNKFEAEMRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAILLRTVLTRSDLGGAIIEGADFSDAVLDLTQKQCLYVPPMIRIHDPSLLGISTVALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGSPSSPLLSAPPQKLLDRDGFCDEATGLCDAK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02536 301 Pfam Pentapeptide repeats (8 copies) 176 210 IPR001646 -
Vimu7g02536 301 Pfam Pentapeptide repeats (8 copies) 134 170 IPR001646 -
Vimu7g02536 301 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 58 300 - -
Vimu7g02536 301 SUPERFAMILY Pentapeptide repeat-like 109 210 - -
Vimu7g02536 301 Gene3D - 107 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02536 Vimu-Chr7 21565274 21568195 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02536 - - pvu:PHAVU_002G061100g 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02536 7 21565274 21568195 Vimu7g02536 7 21565274 21568195 ECH