Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02525 CACGCGAATTTGAGTAAAGGGTCTAGCCTGGTCAGGAGCGGACGAGTGGATTCCCTCACACGACTTTCATCGAACACCTATCCATCTCTAGCAACGTGTCCACCTTCCAACAACCCACGCACAACCCAACCTCCTTTCTGTCATCACCTTCTTCTACTTTACCATCTTCTCCTGCTTTCTCTACAATCACCAATCTCCATGAATCGTGTAGCATTGCCCAAATCCCTTGCCCACCGTTGCAGAGGCATTCACCTCACAACTTGGAAGAGGTTCGGTAAACGTTGCGAAAGCCAGGTCCAAGGTGTCGGGCCCTTGGGCTCTCTTCTCAAGTCCCGTTCCGTTATACGGTTCCGCGGGCCTGACACCCTCAAGTTCCTACAGGGCCTCCTTTCCAACGATGTACGGAGGTTGGGTGACCCCATTGGTGACAAAACTGAAAACTTGCCCACGCCGAACGTGCCTTCTACGTCGGTTCCTCCTATATATGCTGCCTTATTGACCCCTCAAGGGAGATTCCTCTACGACCTCTTTCTCTATAAGCCTCCCACGAGGGACACCAAGCTCGATAACACCGGCTCTGCTCCAGAGTCCAACTCCGATAGACCCTTTCATTTGTTTGCTGACGTGGATGCTTCTGTGTTGGATGAATTGTTGCAAACCTTCAACAATGAAGACTGTGGAAGTAGACTTCTATATGCTGTTCGATTTGGATACCAAGCTCTTATTTTGGTTGGGATTCAGTATCCGAAGGGTTTGCACCACCATGAAGGAGCAGTAAACCAGGTGTCTATCCACATGTCTATATTACCATGGAAGAAAAAGGGCTCATCATCCTCATTGCCAAGAGTGAAAATGCCCCAATTGTTTACATCAGTCCTATTCAAGCCTAAAGGGTGCTGCAGATACCGGTTGAGGTCAAAGGTTGACATTGATGATGTTTCAAGTGATTTCTCATGCTGGCAGCGTTATGGTGCTGGCCTTTCCGAGAAGTCTTCACAAGTAGAAGAACCAGAAGCAGCCTCTGTTGGCTGGGGTGCTGGTGTGGATAGTACTGCAATGTCATCTTCGCATGGGAGTGATAGTGGGTGGCAATGGTTCAAGGATCCCAGATTGACCTCTCTTGGTTTCAGAGGGATCTTCCCATCGAATATAACTCCCCCTCTCATTGAGGTTGACAAAGAGACCGATGAACAGAATTTCCTTATGTGGAGAATAGAGAAGGGAGTGGCTGAAGGATCAACCGAGATTCCAAAAGGTGAGGCGGTACCGCTGGAGTATAATCTTGCAGGCCTTAATGCAGTTAGCTTTGATAAAGGTTGCTATGTTGGCCAAGAACTCATTGCTCGTACACATCACAGGGGGGTGATTCGGAAGCGGATAGTTCCTCTAAGGTTTCTGGACAACGATGGGAAAGAGTTAGTAAGCAAAGTCATTCCAGGCTCAGAAGTAATAAACAAAACATCCGGCAAAAAAGCTGGTACAGTGACAACTGTCCTAGGATGTCGTGGTCTGGGGCTCTTGCGATTAGAGGAAGCTTTAAAGGGGTCCAGTGCCTTGTCCATTCAGGGACAAGAGGATGTGAAGGTTGTCGCTAGTAGACCAGATTGGTGGCCTTCTGAATGGCTTCAAGATCATGGACAGCACGCTGCTTTTGCCTAG 1659 0.4858 HANLSKGSSLVRSGRVDSLTRLSSNTYPSLATCPPSNNPRTTQPPFCHHLLLLYHLLLLSLQSPISMNRVALPKSLAHRCRGIHLTTWKRFGKRCESQVQGVGPLGSLLKSRSVIRFRGPDTLKFLQGLLSNDVRRLGDPIGDKTENLPTPNVPSTSVPPIYAALLTPQGRFLYDLFLYKPPTRDTKLDNTGSAPESNSDRPFHLFADVDASVLDELLQTFNNEDCGSRLLYAVRFGYQALILVGIQYPKGLHHHEGAVNQVSIHMSILPWKKKGSSSSLPRVKMPQLFTSVLFKPKGCCRYRLRSKVDIDDVSSDFSCWQRYGAGLSEKSSQVEEPEAASVGWGAGVDSTAMSSSHGSDSGWQWFKDPRLTSLGFRGIFPSNITPPLIEVDKETDEQNFLMWRIEKGVAEGSTEIPKGEAVPLEYNLAGLNAVSFDKGCYVGQELIARTHHRGVIRKRIVPLRFLDNDGKELVSKVIPGSEVINKTSGKKAGTVTTVLGCRGLGLLRLEEALKGSSALSIQGQEDVKVVASRPDWWPSEWLQDHGQHAAFA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02525 552 NCBIfam folate-binding protein YgfZ 400 464 IPR017703 -
Vimu7g02525 552 SUPERFAMILY Folate-binding domain 108 245 - -
Vimu7g02525 552 PANTHER UNCHARACTERIZED 94 222 IPR045179 -
Vimu7g02525 552 Gene3D Probable tRNA modification gtpase trme; domain 1 93 195 IPR027266 GO:0005515
Vimu7g02525 552 Gene3D Probable tRNA modification gtpase trme; domain 1 299 534 IPR027266 GO:0005515
Vimu7g02525 552 SUPERFAMILY Folate-binding domain 301 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02525 Vimu-Chr7 21498834 21504381 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02525 K22073 - gmx:100804156 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02525 7 21498834 21504381 Vimu7g02525 7 21498834 21504381 ECH